Parastagonospora nodorum: SNOG_07057
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Entry
SNOG_07057 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_07057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_07057
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SNOG_07057
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SNOG_07057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
5974302
NCBI-ProteinID:
XP_001797412
UniProt:
Q0UMF7
A0A7U2I536
LinkDB
All DBs
Position
Unknown
AA seq
356 aa
AA seq
DB search
MAPQQTALVNLSPPELSFLRASLVQHPPIRLDVTKGPRDFRSMRAEYDVLPGANGSARIA
LEDGTEALVGVKAEVEKTPQRPSLGLHEDAEMRDPDVDESAGKGQNAWLDMSVEVPGFRE
DDSLPVFLASMLKESLLASGELKDRLYINRRFHWKLYIDILLLSPPLSYPLALLSMTTHL
ALLTTLLPALKSEQDEDPLFNDDWDAAVPLYPKNKGKKLSDKPPVIILAMAVGPNIIFDP
CKEELAVADAVLAIACTNTSSSSTGARIVSIRTIDPPSHLTPPGIPNSMNSATGGTVPTS
SADALTQRELLAASGVWTPPRGGMKRSLVSQVTKMVVEDGGVAEEVITALAAIEVG
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggcgccccaacagaccgccctcgtcaacctgtcaccgcccgagctgtcgtttctgcgc
gcctccctcgtccagcacccgcccatccgtctcgatgtcaccaaagggccccgcgacttt
cgctccatgcgcgccgagtatgacgtacttcccggcgcgaacgggagtgccagaatcgcc
ctggaggacggcaccgaggccctggttggcgtcaaggctgaggtcgagaagacaccgcag
cgcccgtcattggggctgcacgaagacgctgagatgcgcgacccagacgtggacgagagc
gcgggcaagggccagaacgcgtggctcgacatgagcgtcgaggtgcctggcttccgcgag
gacgactcgctccccgtgttcctagcttcgatgctgaaggagagcttgctggcgagtgga
gagctcaaggaccgcctgtacatcaacaggcgcttccactggaagctctacattgacatc
ttgctgctctcgccacccctgtcgtacccgcttgccctcctctccatgaccacccatctc
gccctcctcacaaccctcctccccgccctcaagtcggagcaggacgaagacccgctgttc
aacgacgactgggacgccgccgtgcccctctaccccaagaacaagggaaagaagctgtcc
gacaagccgcccgtcatcatcctcgccatggcagtcggcccaaacatcatcttcgaccct
tgcaaggaagagctcgctgtcgcagacgcagtcctcgcaattgcttgcaccaacacttca
tcttcctccaccggcgcgcgcatcgtctcaatacgcactattgacccgccatcccacctt
accccgcctggtatacccaattcgatgaattctgcgacgggtggtaccgtaccaacctca
agcgcggatgcccttacccaacgagaactactcgcagcgtcaggagtatggacaccaccg
cgcggcggtatgaagcggagtctggtctcccaggtgaccaagatggtagtcgaggacggc
ggtgttgccgaggaggtcatcaccgcactggcagcgattgaggttggatga
DBGET
integrated database retrieval system