KEGG   Parastagonospora nodorum: SNOG_07057
Entry
SNOG_07057        CDS       T01161                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
pno  Parastagonospora nodorum
Pathway
pno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SNOG_07057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pno03019]
    SNOG_07057
Messenger RNA biogenesis [BR:pno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SNOG_07057
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     SNOG_07057
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 5974302
NCBI-ProteinID: XP_001797412
UniProt: Q0UMF7 A0A7U2I536
LinkDB
Position
Unknown
AA seq 356 aa
MAPQQTALVNLSPPELSFLRASLVQHPPIRLDVTKGPRDFRSMRAEYDVLPGANGSARIA
LEDGTEALVGVKAEVEKTPQRPSLGLHEDAEMRDPDVDESAGKGQNAWLDMSVEVPGFRE
DDSLPVFLASMLKESLLASGELKDRLYINRRFHWKLYIDILLLSPPLSYPLALLSMTTHL
ALLTTLLPALKSEQDEDPLFNDDWDAAVPLYPKNKGKKLSDKPPVIILAMAVGPNIIFDP
CKEELAVADAVLAIACTNTSSSSTGARIVSIRTIDPPSHLTPPGIPNSMNSATGGTVPTS
SADALTQRELLAASGVWTPPRGGMKRSLVSQVTKMVVEDGGVAEEVITALAAIEVG
NT seq 1071 nt   +upstreamnt  +downstreamnt
atggcgccccaacagaccgccctcgtcaacctgtcaccgcccgagctgtcgtttctgcgc
gcctccctcgtccagcacccgcccatccgtctcgatgtcaccaaagggccccgcgacttt
cgctccatgcgcgccgagtatgacgtacttcccggcgcgaacgggagtgccagaatcgcc
ctggaggacggcaccgaggccctggttggcgtcaaggctgaggtcgagaagacaccgcag
cgcccgtcattggggctgcacgaagacgctgagatgcgcgacccagacgtggacgagagc
gcgggcaagggccagaacgcgtggctcgacatgagcgtcgaggtgcctggcttccgcgag
gacgactcgctccccgtgttcctagcttcgatgctgaaggagagcttgctggcgagtgga
gagctcaaggaccgcctgtacatcaacaggcgcttccactggaagctctacattgacatc
ttgctgctctcgccacccctgtcgtacccgcttgccctcctctccatgaccacccatctc
gccctcctcacaaccctcctccccgccctcaagtcggagcaggacgaagacccgctgttc
aacgacgactgggacgccgccgtgcccctctaccccaagaacaagggaaagaagctgtcc
gacaagccgcccgtcatcatcctcgccatggcagtcggcccaaacatcatcttcgaccct
tgcaaggaagagctcgctgtcgcagacgcagtcctcgcaattgcttgcaccaacacttca
tcttcctccaccggcgcgcgcatcgtctcaatacgcactattgacccgccatcccacctt
accccgcctggtatacccaattcgatgaattctgcgacgggtggtaccgtaccaacctca
agcgcggatgcccttacccaacgagaactactcgcagcgtcaggagtatggacaccaccg
cgcggcggtatgaagcggagtctggtctcccaggtgaccaagatggtagtcgaggacggc
ggtgttgccgaggaggtcatcaccgcactggcagcgattgaggttggatga

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