Parastagonospora nodorum: SNOG_13012
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Entry
SNOG_13012 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
pno
Parastagonospora nodorum
Pathway
pno03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SNOG_13012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pno03041
]
SNOG_13012
03400 DNA repair and recombination proteins [BR:
pno03400
]
SNOG_13012
Spliceosome [BR:
pno03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SNOG_13012
DNA repair and recombination proteins [BR:
pno03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
SNOG_13012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
SAP
Motif
Other DBs
NCBI-GeneID:
5980138
NCBI-ProteinID:
XP_001803226
UniProt:
Q0U5F2
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MADTQDNRPGEEEDDDEEIDESLKLHSHNLQAYKTMKDAVLFAIDVSPSMLERPPKTEDK
KADRDSPTSAALKCAYQLMQQRIISNPNDMMGILLFGTEKTDLKDGDSTFQHCYLLADLD
VPSAQDVKRLRDLVEDEEEAEQILKPAKDGASIATVLFCANQIFTTKAPNFSSRRLFLVT
DNDYPVNVKADKDTAVTRARDLYDLGCTIDLFPISQPDQTFDRSRFYDDLVYPTSPSDPD
APIAVATTTKVAKSGEGITLLKQLISSINSKATPRRALFSLPLELGPDLRIGVKGYILIK
RQEHAKSCYVWVGGDKPQIVSSSTSHMADDTARVVEKTELRKAYKFGGDAITFTPDEIIK
IRQAFGDPIIRIIGFKPISCLPIWTNTNKATFIYPSEADFIGSTRVFSALQQKLLKSKKM
GLVWFIARRNAAPILSALIPAEEQTNEDGEQAMPPGLWLVPLPWADDIRQFPSPAADVLK
TTDALTDKMRIIIEQLQLPKGVYDPAKYPNPDLQWFYRILQAMALEEELPEKPDDKTMPK
FRQIDKRCGEYITEYGAEFEAAFAQLAVSTFPHRGKRASADPGDDKPAPKRVKKEPKVKE
EGEDDEGLTDEQMATVNNKGQISKQTVAVLKAWLSQRGESTSGKKADLVERVQGYLEGKG
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacgcaggacaatcggccaggcgaggaagaggatgacgacgaggagattgat
gaatcgctcaagctgcattctcacaacttgcaggcgtacaagactatgaaagatgccgtc
ctcttcgccatcgatgtcagcccctccatgctcgaacgcccgcccaagaccgaagacaag
aaagcagatcgggactcgcccacttcggctgcactcaaatgcgcctaccagctgatgcag
cagcggatcatctcgaatccaaacgacatgatgggcatactgctgtttggcacagagaag
acagacctcaaagacggcgacagcacgttccagcactgctacctgctagctgacctggac
gtgccatcggcgcaggatgtgaagcggctgcgagacttggtcgaggacgaggaagaggca
gagcagattctgaagcctgcgaaagacggcgcaagcatagcaacagtgctgttctgcgcc
aaccagatcttcacaaccaaagcacccaacttctcctcaagacggctcttcctcgtcacc
gacaacgactacccagtcaacgtcaaagcggataaggacacagcagtcactcgcgcgcgt
gacctgtatgatctcgggtgcactatcgacctcttccccatctcacaaccagaccaaacc
ttcgatcgctcgcgcttctacgacgatctcgtataccccacatcgccgtctgatccagat
gcacccattgcagtagcgacgacgacaaaggtcgcaaaaagtggcgagggcataacgctg
ctcaagcagttgatctcgtcgataaactcaaaagccacgccgcgccgcgctctgttcagc
ctgcccctcgagttgggcccggacttacggataggcgtgaaaggctacatcttgatcaag
cgtcaagaacatgccaaatcatgctacgtctgggtcggcggagacaagccacaaatcgtc
tcctcgtcaacgtcacacatggccgatgacacagcgcgtgtggttgagaagacggagcta
cgcaaggcatacaagtttggaggcgacgccatcaccttcacaccagacgaaatcatcaag
atcagacaagccttcggcgaccccatcatccgcatcatcggcttcaagcccatatcctgc
ctccccatatggacaaacaccaacaaagcaaccttcatctacccttcagaagcagacttc
atcggctccacccgcgtcttctctgccctccagcaaaaactcctcaagtccaagaaaatg
ggtctcgtctggtttatcgcgcgccgcaacgctgcccccatcctcagcgccctgatcccc
gccgaagaacaaaccaacgaagacggcgagcaggccatgccacctggtctctggctcgtg
cccctgccctgggcagacgacatacgccaattcccctcgcccgctgccgacgtgctcaaa
accaccgatgcgctcacagacaaaatgcgcatcatcatcgagcaactacaacttcccaag
ggcgtgtacgacccggctaaatacccgaacccagatctccagtggttctaccgcatactg
caggctatggcgctcgaggaagaattacccgagaaaccagacgacaagacgatgcccaag
ttccgacaaatcgacaagcgctgtggcgaatacatcaccgagtacggcgcggagttcgaa
gcggcgtttgctcaactcgccgtctctacattcccgcatcgcgggaagcgcgcgtctgcg
gacccaggcgacgacaagcctgcgcctaagcgtgtcaagaaggagccgaaggtcaaggag
gaaggggaggatgacgagggactcacggatgagcagatggcgacggttaataataaaggg
cagattagcaagcagactgttgcggtgctgaaggcgtggttgagtcagaggggggagagc
acgagtgggaagaaggcggatcttgtggagagggtgcaagggtatcttgaggggaagggg
ctttga
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