Parastagonospora nodorum: SNOG_15803
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Entry
SNOG_15803 CDS
T01161
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
pno
Parastagonospora nodorum
Pathway
pno03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SNOG_15803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pno03019
]
SNOG_15803
Messenger RNA biogenesis [BR:
pno03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SNOG_15803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_17
TPR_19
TPR_CcmH_CycH
TPR_14
ARM_TT21_5th
TPR_11
TPR_16
ARM_TT21_C
Rsa3
E_motif
AimR
Motif
Other DBs
NCBI-GeneID:
5982871
NCBI-ProteinID:
XP_001805941
UniProt:
Q0TXP6
A0A7U2FBF3
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MASHADSAHDLLNLPISTLRQYVELFPKEGLSKVITGYLSSGVSRYPLRDKPKNAPDLSE
GGVALDDNDPLTQEDCLVLMTEGIQETKQSALAHCLLGDFYLFLEEYESTVESTRKGLKY
AASEAKKTDLSFQQTLDALNSTLATALVYYQAPRNHLEAKNIFQSILERKPQFTSALIGI
GLVLEEEEEYEQAHDFLEKALKQDSSNGRIGAESAWCQALAGDYKTGLERLQEYLEYPQL
DASTQRGRELRAQTLYRIGMCIWELDSSNASRRDKQGAYAKFFAAIKANPNYAPPYTMLG
IFFEDYNKDRKRARQCFQKAFELSPSEIVAAERLARLFANQGEWDIVEVVSQRVVDSGKA
RQVPGSKRKGVSWPYSALGVVQMNKQEYQKSVVSFLSALRISPDDYYSYVGLGESYHNSG
RYNSASRAFKYAENPADNVLKKRSEDESWFTKYMLANVNRELSEFDEALSGYEAVLATRP
KEFGVSIALLQTLVEKGWRCIETGFFGEAIDSAIRGLEVAATIAEYKPDAFNLWKAIGDA
CSLFTWAQERLPEFPADDVLDLLRSKSDVGVDFDVFRDIDDIGSDALASLTAEKEPMLAK
ALRAAILAQKRAVASCAHDKHAQAVAWYNLGWTEFRAHVCLEQECSSDGSMTTFLRAAMK
CFHRAIGQEAGNSEFWNSLGVITSTLNPKVAQHAFVRSLHLNDRSVHTWVNLGALYLLQN
DTELAHQAFSRAQSQDPDYSLAWVGEGLVALLANDSKEALSHFTHAFELAESSLLLTKRQ
YALSTFDFLISSPSAGGDITNLIQPLFALQQLNFQAPYDMPHKHLAALFLERVGNHEAAV
KALQSVSENVEQEYENSESQKSLARVAQAKTDLARNLLATGSNEAAGEEAETALDLISEV
DTNAGVLSTEQLSKVQLSARLTAGLAHYFNGALDAAIPYFRTSLEATSSNPDIICLLAEV
LWAKGGANEKQVARDQLFTAIEKHEGHVGLLTLIGAMTVLDDDLETMEAIKDDLDRLRTN
KDLTDDQLARVEKVIEAISISLGGEEQELDEARRSIMLTPWKHTGWSELADAADGDVYAS
TMAKETAMRNAPPNGSLGAVGLAGALAATGHVIDAQRAIALAPWSTAGWNALAESIKSA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcacatgcggacagcgcgcacgacttgctcaatctgccaatatcaaccctgcgg
caatacgtcgagttatttccaaaagagggtctttccaaagtcatcacgggatatctgagc
agtggtgtttcaagatacccgctcagagacaagcccaagaatgctccagatttgagcgaa
ggtggggtagctcttgacgataacgaccccctcacacaggaagactgcttggtcttgatg
acagaaggcatacaagagacgaagcaatctgcactcgcacattgcttgctgggtgacttt
tacttgttcctggaagagtacgagagtactgtcgaaagcacgcgcaagggattgaagtat
gccgcttccgaagcaaagaagaccgatttgtcatttcagcagacactcgatgcactcaac
agcactcttgccactgcccttgtttactaccaagcgcctagaaatcacttggaggctaag
aacatcttccagtcaattcttgagcgcaaaccgcaattcacttcagctctcattggcatt
ggcctggttctagaagaggaggaagaatatgagcaagcccatgacttcctggagaaggcg
ctgaaacaagattcttccaacggacgtatcggtgcagagtcagcatggtgtcaagcactc
gccggggactacaagactggcctagagagacttcaagaatacctcgagtacccgcaactg
gatgcttccacccagcgtggtcgtgagcttcgtgctcaaacgttgtacaggatcggtatg
tgcatatgggagctcgactcctcaaatgcttcacggcgagacaagcaaggcgcgtacgca
aagttcttcgctgcaatcaaagcgaaccccaactacgcgccaccctataccatgctgggt
attttctttgaagactacaacaaagatcgcaagcgagcgcgccaatgtttccagaaagcc
ttcgagctatcgccatcagagatcgtcgcagctgagcgccttgctcgactgtttgccaat
caaggtgaatgggatatcgtggaagtcgtttcacaaagggtagtcgactcgggtaaagca
cgtcaagtaccaggatcgaagcgaaaaggcgtcagctggccctactcggcgctcggtgtt
gtccagatgaataagcaagagtatcagaagagtgtggtctcttttctttcagcactgcgc
atcagccctgatgactattattcatacgtcggcctcggtgaaagctaccacaactcgggc
aggtataactctgcatcgcgagccttcaaatacgccgagaacccagccgacaacgttctc
aagaagcgatccgaagacgagagctggttcaccaaatacatgttggcaaacgtcaaccgg
gaactaagcgaatttgacgaggcgctgtctggctatgaagcagtccttgctacccgacca
aaggagtttggcgtatccattgcacttttacagacattggtcgagaaaggatggcgctgc
atcgagaccggcttcttcggtgaagctatcgacagtgccatccgtggtcttgaggtcgca
gcaaccatcgcggaatacaagcctgacgctttcaatctttggaaggctatcggagatgca
tgtagcttgttcacctgggcacaagagcgactacccgaatttccagcggatgatgtgctt
gacttactccggagcaagtctgatgttggcgtcgacttcgatgttttcagggacatcgat
gacattggaagcgatgccttggcatctctcacagcggaaaaggaacccatgctcgcaaag
gccctgcgcgctgctatactcgctcaaaagcgagctgttgcaagctgcgcgcacgacaag
catgcccaggcagtggcatggtacaatctcggttggactgaatttcgagctcatgtctgt
ctggaacaggaatgcagcagcgatggaagcatgacgacatttctccgagcggcgatgaaa
tgctttcatcgcgctattggacaggaggcgggcaactccgaattttggaactcgctaggt
gtcatcacatctacactgaatccgaaggttgcacagcatgcgtttgtcagatcactacac
ctgaacgacagaagcgtgcacacttgggtcaatctgggcgcattgtatttgctgcagaat
gatacagagcttgcacatcaagctttctcccgtgcacagtctcaagacccagactactcc
cttgcctgggtcggtgaaggccttgtcgcgttattggctaacgactcgaaagaagcgctg
tcccactttacgcatgctttcgagcttgctgaatcttccttgcttcttaccaagcgacag
tacgctctgtcgacattcgacttcctaatttcttcaccttcagctgggggcgacattacc
aatctcattcaaccactttttgctttacagcagctcaacttccaggcgccctacgacatg
ccccataagcatctggcagctttgttcttggaacgggtcggaaaccatgaagcagctgta
aaggcattgcagtccgtgagcgagaatgttgagcaagagtacgagaattcggaatcgcag
aagtcattagcacgcgtcgcacaagcgaagacagatctggcacgaaaccttctcgccaca
gggtccaacgaagccgcaggtgaagaagctgaaactgctcttgatctcatttccgaggtc
gacactaatgctggcgttctttccacagagcaattatccaaggttcagctctcggcgcgc
ctcacggcagggttagcacactacttcaacggcgctctcgatgccgccatcccatacttc
cggacctcgctcgaagcgaccagctcaaatccagacatcatttgtcttctcgccgaggtt
ctgtgggccaagggaggcgcaaatgaaaagcaagttgcacgcgaccagcttttcaccgca
atcgagaagcatgaaggccatgtcggtctcttgactttgatcggcgccatgaccgttctc
gacgacgatctcgaaacaatggaagccatcaaagacgacctcgatcgcttgcgcacgaac
aaagaccttacagacgaccaacttgctcgcgtggagaaggtcatcgaagccatctccatt
agtcttggcggtgaggaacaagagctcgacgaagccaggcgaagcatcatgcttaccccg
tggaaacacacgggctggtccgaactcgcggacgcagcggatggcgatgtttatgctagc
acaatggcgaaggagacggcgatgcgcaatgcgccgccgaatggaagtttgggcgctgtt
ggactggcaggagcgttggctgctacggggcatgttattgatgctcaaagagcgattgcg
ttggcgccgtggagtacggcggggtggaatgcgttggcggagagtattaagagcgcttga
DBGET
integrated database retrieval system
