Pseudomonas nitroreducens: G5B91_03585
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Entry
G5B91_03585 CDS
T08828
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pnt
Pseudomonas nitroreducens
Pathway
pnt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G5B91_03585 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnt03021
]
G5B91_03585 (rpoA)
03400 DNA repair and recombination proteins [BR:
pnt03400
]
G5B91_03585 (rpoA)
Enzymes [BR:
pnt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G5B91_03585 (rpoA)
Transcription machinery [BR:
pnt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G5B91_03585 (rpoA)
DNA repair and recombination proteins [BR:
pnt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G5B91_03585 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QIE85397
UniProt:
A0A6G6IQZ3
LinkDB
All DBs
Position
727351..728352
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSQTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGSGVVTAADIQLDHD
VEIVNGDHVIAHLADNGALNMKLKVARGRGYEPADARTSDEDESRSIGRLQLDASFSPVR
RVAYVVENARVEQRTNLDKLVLDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VEEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccacatcgatgtgcaggtggtcagc
caaacccgcgccaagatcactctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgtcgcatcctgttgtcctccatgcctggctgtgcggtagtcgaggccgag
atcgacggcgtactccacgagtactccgccatcgaaggtgtgcaggaagatgtcatcgag
atcctgctcaacctgaaaggcctggccatcaagctgcacggccgtgacgaagtgacgctg
accctggcgaaaaagggctcgggtgtggtgaccgctgccgatattcagctggatcatgat
gtcgagatcgtcaacggtgaccatgttatcgcccacctggccgataacggcgcgctgaac
atgaagctgaaagtcgctcgtggccgtggctacgagccggctgatgcccgcaccagcgat
gaagacgaaagccgtagcattggccgtcttcagctcgatgcctcgttcagccccgtacgt
cgtgttgcctacgtggtcgagaacgcccgtgtcgaacagcgtaccaacctggacaagctg
gtcctcgatctggaaaccaacggcaccctggaccctgaagaggctatccgtcgcgccgct
accatcctgcaacagcagctggcagcgttcgtggacctcaaaggcgacagcgagcccgtc
gttgaagagcaggaagacgagatcgatccgatcctgctgcgtccggtcgatgaccttgag
ctgaccgtccgttcggccaactgcctgaaggcagagaacatctactacatcggtgacctg
attcagcgcaccgaagtagagctgctcaaaacgccgaacctgggcaagaagtccctgacc
gaaatcaaggacgttctggcctctcgcggtctgtccctcggtatgcgcctcgataactgg
ccgccggcaagtctcaagaaagacgacaaggctactgcctga
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