Paenarthrobacter nicotinovorans: JMY29_04515
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Entry
JMY29_04515 CDS
T08055
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pnv
Paenarthrobacter nicotinovorans
Pathway
pnv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMY29_04515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnv03400
]
JMY29_04515
Enzymes [BR:
pnv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JMY29_04515
DNA repair and recombination proteins [BR:
pnv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JMY29_04515
Prokaryotic type
JMY29_04515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UKF04853
LinkDB
All DBs
Position
complement(936040..936807)
Genome browser
AA seq
255 aa
AA seq
DB search
MTGEDALFDLEPAGPEDAGLAALLDRPIEELMAPDWADALRPVEGQLRDALSFAARRAND
GKQILPASGNILRAFQQPLSDVKVLLLGQDPYPTPGHAVGLSFSVSRETRPIPRSLANIY
RELHDDLGLPPRVHGDLSAWTEQGVLLLNRVLTVEARNAGAHRGKGWEAITTAAVTAVAL
RTDGAGRQKPLVAILWGKDAESVVPLLEGAPSVVSVHPSPLSASRGFFGSKPFSRTNALL
VEQGAKPVDWELPVL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
gtgactggcgaggatgctctctttgatcttgaacctgcgggcccggaggacgcgggcttg
gctgcgctgcttgaccgtccgattgaggagctgatggctcccgactgggccgatgccctg
cgtccggtcgaaggccaactgcgcgatgccctgtcctttgccgcccggcgtgccaacgac
ggcaaacagatcctccccgcctccgggaacatcctccgggcgttccagcaacccttgtcc
gacgtcaaagtcctcctcctgggccaggatccctatccgacaccgggacacgccgtggga
ctttccttctccgtctcgcgcgaaacacggcccatcccccgcagccttgccaacatttac
cgagagcttcatgacgacctcggcctcccaccccgcgtccatggcgatctcagcgcatgg
acggagcaaggcgtcctcctcttgaaccgcgtcctcaccgtcgaggcccgcaatgccggc
gcccaccgggggaaaggatgggaggccatcacgacggcggcagtcaccgccgttgcactg
cggacggacggtgcgggacggcagaagccgctggtcgcaatcctgtggggcaaagacgcc
gaaagtgtcgtgccgctgctggagggggcgccgtcggtggtctccgtccatccaagcccg
ctctcggcgtcccggggcttcttcggttccaaacccttcagcaggaccaacgcattgttg
gtcgaacaaggcgcgaaacctgtcgactgggaactcccggtcctgtag
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