KEGG   Populus nigra (Lombardy poplar): 133675131
Entry
133675131         CDS       T10372                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
pnz  Populus nigra (Lombardy poplar)
Pathway
pnz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pnz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133675131
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pnz03041]
    133675131
Spliceosome [BR:pnz03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    133675131
 Complex B
    133675131
 Complex C
   U2 SnRNP specific factors
    133675131
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 133675131
NCBI-ProteinID: XP_061952392
LinkDB
Position
16:complement(1131509..1137360)
AA seq 509 aa
MSSTLLEVTRASHEEVERLERLIVKDLQNEPANNKDRLFQSHRVRNMIENIIATTEKLVE
VYEDRDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHPAARVVDANEDYEAML
KEEPVIEFTGEEAFGKYLDMHELYNQFNNLKFEKPIEYSTYLDIFSQPHNLPRKVKFTRQ
YREYMENLLEYLFYFFQRTEPLQDLDRILSKVTTEFEEQWENGTVQGWEKNAQENGHVPA
DHTVIDLDFYSTVEELKEVGPEKLKEALAALGLKSGGTIQQRAERLFLTKHTPLEKLDKK
HFVKGSCASEPNGGAVNSKEVVNSKEIALMETKMNKLCDLLDETIVRTKENVVKKQALTY
DEMEAEREEEETQADTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQELKCEICG
NYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAQELWKRIQARQGVNKWR
PDLEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgactctattagaggtgactcgagcctctcacgaggaagtagagagactcgaa
cgacttatcgttaaagatctccaaaatgaaccagcaaacaacaaggaccgtctttttcaa
agccaccgtgttcgtaacatgatcgaaaatatcattgccactactgagaaactcgttgag
gtttatgaagatagagataatgcgaggaaggatgagattgcggcgcttggtggacaaacg
gcgaccggaaccaatgtgtttagtgctttttatgatagattaaaagagattcgtgagtat
catagaaggcatccagcggcgcgtgtggttgatgctaatgaggattatgaggcaatgctt
aaagaggaaccagttattgagtttactggtgaggaagcatttgggaaatacttagacatg
catgaattgtataaccagttcaataatttaaaattcgagaagcctattgaatactctact
taccttgacattttctcccaaccacataatttaccccgtaaagtgaagtttacaaggcaa
tacagggaatacatggagaatctacttgaatatttattttattttttccagaggacagag
cccttgcaagatcttgataggattttgtcaaaggttactactgaatttgaagagcaatgg
gaaaatggcacggtacaaggatgggaaaagaatgctcaagaaaatgggcatgtgccagct
gatcatactgttattgatcttgatttttacagcactgttgaggagcttaaagaagtgggc
cctgaaaaattgaaggaggcattggctgcattggggctcaagagtggcggtaccattcag
cagcgtgctgaaaggctttttctcacaaagcatacacctcttgaaaagctggacaagaaa
cattttgtgaaaggttcatgtgcatcagaaccgaatggaggtgctgtgaactcaaaggaa
gttgtcaattcaaaagaaattgccctgatggagaccaaaatgaataaattgtgtgattta
ctggatgagacaattgtacggacaaaagaaaatgttgtgaagaagcaggctttgacatat
gatgaaatggaagcagaacgtgaggaggaagagacacaggctgacactgaaagtgacgat
gaagaacaacagatttacaatcccctcaagttgccaatgggttgggatgggaagcctata
ccgtactggctgtataaacttcatggtcttggtcaggaacttaaatgcgagatatgtggg
aactatagttactggggtcgtagagcgtttgagcggcatttcaaggaatggcgtcatcag
catggaatgcgttgccttggcatcccaaacaccaagaacttcaatgagatcacatcgatc
gaggaagcacaggaattatggaagaggatacaagcgcggcaaggagtgaacaagtggcgc
ccagatcttgaggaagaatatgaagataaagagggcaacatttacaataaaaagacatat
actgatctgcagcgccagggactgatttga

DBGET integrated database retrieval system