Populus nigra (Lombardy poplar): 133675968
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Entry
133675968 CDS
T10372
Name
(RefSeq) serine/arginine-rich splicing factor SR34A-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133675968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pnz03041
]
133675968
Spliceosome [BR:
pnz03041
]
Common components
Common spliceosomal components
SR proteins
133675968
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Transformer
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
133675968
NCBI-ProteinID:
XP_061953526
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Position
16:268673..273202
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AA seq
256 aa
AA seq
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MSGRFSRTIYVGNLPADIRESEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSNDRRGGYGSGGGSGGRFGISRHSEFRVIVRGL
PSSASWQDLKDHMRKAGDVCFAEVSRDSDGTFGVVDYTNHEDMKYAIRKLDDTEFRNPWA
RAYIRVKQYESSPSRSRSRSRSRSRSSRRNRSKSLERSVSRSRSKSRSASPLKSSRPRSR
SGSRSESPNKARSGSA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtcgcttttctcgtacaatctatgttggcaatttgcctgcagatataagagaa
tcagaaattgaagatttattttacaagtatggccgtatcctggatgttgaattgaagatt
ccacctcgccccccttgttattgttttgtcgagtttgagaatgctcgggatgctgaagat
gcaataaggggtcgcgatggctataactttgatggttgtaggttaagggttgagcttgcc
catggtggtagaggaccatcatcaaatgatcgccgtggggggtatggcagtggtggtggg
agtgggggtcggtttggcatctcacgccattctgaatttcgagttattgttcgtggtctt
ccttcttctgcttcctggcaagatttgaaggatcatatgcgaaaagctggagatgtgtgt
tttgctgaagtttctcgtgatagtgatgggacttttggcgttgttgattatacaaaccat
gaagacatgaaatatgctattcggaaacttgatgatactgagttcagaaatccttgggcc
agagcttatattcgggtgaagcagtatgagagctctccatcaaggagcaggagccggagc
cgtagcagaagccgaagttcaaggagaaaccggagcaaatcattggaacgatctgtttca
aggtcaaggtcaaaatctagatctgcttcacctcttaaatcatccagaccaagatcaagg
tccgggtccaggtcagaatctcccaacaaggcacggtccggaagtgcctga
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