Populus nigra (Lombardy poplar): 133677480
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Entry
133677480 CDS
T10372
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic-like
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00906
Carotenoid biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M01040
Lutein biosynthesis, plants, lycopene => lutein
pnz_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
133677480
Enzymes [BR:
pnz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
133677480
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Thi4
FAD_oxidored
HI0933_like
Pyr_redox
Pyr_redox_3
NAD_binding_8
FAD_binding_2
FAD_binding_3
Trp_halogenase
GIDA
Motif
Other DBs
NCBI-GeneID:
133677480
NCBI-ProteinID:
XP_061955553
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Position
17:11754092..11756210
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AA seq
504 aa
AA seq
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MDTLLKTHNKLEFLPQSHGFSEKLSNLSSIKIQSQQLRFGHKKFRSKRGRNGCVKASSNA
LLELVPETKKENLEFDLPMYDLSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP
KLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDDKTKKDLDRPYGRVNRRQLKSKML
QKCISNGVKFHQTKVIKVIHEESKSLLICNDGVTIQASVVLDATGFSRCLVQYDKPYDPG
YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNNNLELKESNSKIPTFLYAMPFSSNRIFL
EETSLVARPGVPMKDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSDRSFSGSELSAKVWKDLWPIERRRQRE
FFCFGMDVLLKLDLPATRRFFDAFFNLEPRYWHGFLSSRLFLPELVLFGLSLFSHASNPS
RLEIMAKGTLPLVNMINNLIQDRK
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatactctgttgaaaacacataacaaacttgaatttttgcctcaatctcatgggttt
tcagagaaattaagtaatttgagctccataaagattcaaagccaacaacttaggtttggt
cacaagaagtttcgttcaaaaagggggagaaatggttgtgttaaggctagtagtaatgca
cttttggagcttgtaccagaaaccaagaaggaaaatcttgagtttgatcttcctatgtat
gacctctcgaagggtcttgtagttgaccttgcagttgtggggggtggtcctgctgggctt
gcagttgcgcagcaagtttcggaggcagggctctcagtttgttctattgatccatctccc
aaattgatttggcctaataattatggtgtttgggtggatgagtttgaagccatggatctg
cttgattgccttgatacaacttggtctggtgctgttgtatatgttgatgacaagacaaag
aaagatcttgataggccttatgggagggttaataggaggcagctcaagtccaaaatgtta
cagaaatgcatatctaatggtgtaaagtttcaccaaactaaagtcatcaaggttattcac
gaggagtccaaatctctattgatttgcaatgatggtgtcacaatccaagcttctgtggtt
cttgatgcaactggcttttctagatgccttgttcaatatgataagccatatgatccaggt
taccaagtggcttatggaattttggcagaggtagaagagcacccatttgatgttgataag
atggtttttatggattggagagattcacatctgaacaacaatctagaactaaaagagagt
aatagcaagatccctacttttctctatgcaatgcccttttcgtcgaacaggatatttctt
gaagaaacttccctcgtagctaggcctggagtacccatgaaagatatccaggaaaggatg
gtggccaggttaaggcacttaggtataaaagtgaaaagcattgaggaagacgagcgttgt
gtcattccaatggggggccccctccccgtgctccctcaaagagttgttggaattggtggt
acagctggtatggtgcacccttcgactggttatatggtagcaagaactctagcggctgct
ccaattgttgctaactctatcgttcagtatcttggttctgatagaagcttttctggaagt
gaattatcagctaaagtttggaaagatttatggccaatagagaggaggagacagagagag
ttcttctgttttggtatggatgttttgcttaagcttgatttacctgccacaagaagattt
tttgatgcattttttaatctggaacctcgttattggcatggattcttgtcatctcgactg
tttctacctgagcttgtactctttgggctctcactgttctcccatgcttctaatccttct
aggttagagattatggcgaagggaacccttcctttggttaacatgatcaacaatttaata
caggacagaaaatag
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