Populus nigra (Lombardy poplar): 133690041
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Entry
133690041 CDS
T10372
Name
(RefSeq) lycopene beta cyclase, chloroplastic/chromoplastic
KO
K06443
lycopene beta-cyclase [EC:
5.5.1.19
]
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz00906
Carotenoid biosynthesis
pnz01100
Metabolic pathways
pnz01110
Biosynthesis of secondary metabolites
Module
pnz_M01040
Lutein biosynthesis, plants, lycopene => lutein
pnz_M01045
Zeaxanthin biosynthesis, lycopene => beta-carotene => zeaxanthin
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
133690041
Enzymes [BR:
pnz01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.19 lycopene beta-cyclase
133690041
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GFIT
Motif
Pfam:
Lycopene_cycl
Pyr_redox_2
DAO
Pyr_redox
Thi4
NAD_binding_8
HI0933_like
Pyr_redox_3
FAD_oxidored
FAD_binding_2
FAD_binding_3
Trp_halogenase
GIDA
XdhC_C
3HCDH_N
Motif
Other DBs
NCBI-GeneID:
133690041
NCBI-ProteinID:
XP_061966170
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Position
3:24169893..24172048
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AA seq
504 aa
AA seq
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MDTLLKTHNKIEFLPQFHGFSEKVSNSSSVKIQIQELRYGPKKFFSKGGRNGCVEASSSA
LLELVPETKKENLEFDLPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPSP
QLIWPNNYGVWVDEFDAMDLLDCLDTTWSGAVVYVNDKTKKDLDRPYGRVNRKQLKSKML
QKCISNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAVVVLDATGFSRCLVQYDKPYNPG
YQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNNNLELKERNSKTPTFLYAMPFSSDRIFL
EETSLVARPGVPMKDIQERMVARLRHLGIKVKSIEEDERCVIPMGGPLPVLPQRVVGIGG
TAGMVHPSTGYMVARTLAAAPIVANSIVQYLGSDRSFSGSELSTKVWKDLWPIERRRQRE
FFCFGMDILLKLDLPATRRFFDAFFDLEPHYWHGFLSSRLFLPELVLFGLSLFSHASNTS
RLEIMAKGTLPLVNMANNLIQDRE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggatactttgttgaaaacacataacaagattgaatttttgcctcaatttcatgggttt
tcggagaaagtgagtaattcaagctccgtaaagattcaaatccaggaacttaggtatggt
cccaaaaagtttttttcaaaaggggggaggaatggttgtgttgaggctagtagtagtgca
cttttggagcttgtaccagaaaccaagaaggaaaatcttgagtttgatcttccgatgtat
gacccatcgaaaggccttgtagttgaccttgcagttgtggggggaggtcctgcagggctt
gctgttgcgcagcaagtttcggaggcagggctctcggtttgttcgattgatccatctcct
cagttgatttggcctaataattatggtgtttgggttgatgaatttgatgccatggatttg
cttgactgccttgataccacttggtctggtgctgttgtctatgttaatgacaagacaaaa
aaagatcttgataggccttatgggagggttaataggaagcagctcaagtccaaaatgtta
cagaaatgcatatccaatggtgttaagtttcaccaagctaaagttatcaaggttattcat
gaggagtccaagtctctattgatttgcaatgatggtgtcacaatccaagctgtcgtggtt
cttgatgcaactggtttttctagatgccttgttcaatatgacaagccatataatccaggt
taccaagtggcgtatggaattttggcagaggtagaagagcacccgtttgatgttgataag
atggtttttatggattggagagattcacatctgaacaacaatctggaactaaaagagaga
aacagcaagacccctactttcctctacgcaatgcccttttcatcggacaggatatttctg
gaagaaacttccctcgtagctaggcctggagtacccatgaaagatatacaggaaaggatg
gtggccagattaaggcacttaggtataaaagttaaaagcatagaggaagatgagcgttgt
gtcattccaatgggtggaccccttcctgtgctccctcaaagagtagttggaattggtggt
acagccggtatggtgcacccttcaactgggtatatggtagcaagaactctagcagctgct
ccgattgttgctaattctatcgtgcagtatcttggttctgatagaagcttttcaggaagt
gagttatcaactaaagtttggaaagatttatggcccattgagaggaggagacaaagagag
ttcttctgttttggtatggatattttgcttaagcttgatttacctgccacaagaagattt
tttgatgcattttttgatctggaacctcactattggcatggattcctgtcatctcgactg
tttctacctgagcttgtactttttgggctttcactgttctcccatgcttctaatacttct
aggttagagattatggcaaagggaactcttcctttggttaatatggccaacaatttaata
caggacagagaatag
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