Populus nigra (Lombardy poplar): 133698037
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Entry
133698037 CDS
T10372
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133698037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133698037
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133698037
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS_3
PAS
NANM
F-box-like
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
133698037
NCBI-ProteinID:
XP_061976890
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Position
6:complement(9992540..9995455)
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AA seq
623 aa
AA seq
DB search
MSKPQEEEEEFQSSGKRLKCTKSLKDDEMESDVSLMEDTRGGLFFHPTTPVSFVVSDALE
LDFPIIYVNKVFEIFTGYHAHEVLGRNCRFLQYRDPRAQRRHPLVDPAVVSEIRRCLEEG
MEFQGELLNFRKDGTPLVNRLRLVPIHDDDGIITQVIGIQVFSEAKIDLNHVSYPVYKET
CNQRSDHSANYSPRHGQSPFTQHQEICGILQLSDEVLAHNILSRLTPRDVASIGSVCRRI
RQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKVTVGGAVE
PSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWQRISVKSSPPGRWGHTL
SCLNGSWLVVFGGCGRQGLLNDVFVMDLDAKQPTWKEVSGGTPPLPRSWHSSCTIEGSKL
VVSGGCTDAGVLLSDTYLLDLTIDKPIWREIPTSWAPPSRLGHSLSVYGRTKILMFGGLA
KSGHLRLRSGEAYTIDLEDEEPHWRQLECSALTGIGSQSSVVPPPRLDHVAVSMPCGRII
IFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKLAWGHSTCVVGGTRVLVLGGHT
GEEWILNELHELCLASKQDLEQP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccacaagaagaagaagaagagtttcaaagctcaggcaaaaggctgaaatgc
accaaatcccttaaagatgatgaaatggaaagcgatgtttcattaatggaggatacaaga
ggagggttgtttttccacccaacgacacccgtatcttttgtggtttcggatgccttagag
cttgattttcctatcatttatgtcaacaaggtcttcgagatcttcactggctaccatgct
cacgaggtcctcggtcgcaactgtcggttcttacaatacagggatccccgtgctcaaaga
aggcatcctttagtagaccctgctgttgtttctgaaatcagaagatgtctcgaggaaggg
atggaattccaaggtgaacttctaaactttaggaaggatggtactccactggtgaacagg
ctcagacttgtacctatacacgatgatgatggaattatcacacaggtaataggtattcag
gtattttctgaagccaaaatagatctgaaccatgtatcatatccagtctacaaagagact
tgcaatcaacggtctgatcactcagctaattattctccacggcatggacaatcaccattt
actcagcatcaagaaatatgtgggatacttcagttgtctgatgaagtattggctcataac
attctatcacgcttgacaccaagggatgttgcatccattggatctgtctgcagaagaatc
cggcaattaacaaaaaatgagcatgtaaggaagatggtttgtcaaaatgcatggggaaga
gaagtcacaggtgcattggagctgatgactaaaaagttgggttggggacgtctggcaagg
gaactgactaccctcgaagctgtctgctggaggaaagtgacagttggaggtgcggttgag
ccttcacgttgcaatttcagtgcatgtgcagtagggaatagacttgtattgtttggaggg
gaaggagtaaacatgcagccgatggatgacacttttgttctcaatcttgatgctgcaaat
ccagagtggcagcggataagtgtgaaatcatccccaccagggcgctggggtcacactctt
tcttgcctaaatggttcctggttggtggtgtttggaggatgtggaaggcaagggttgctc
aatgatgtctttgttatggacttggatgccaagcagccgacatggaaggaagtttctggt
ggaactccccctcttcctagatcgtggcatagctcttgcaccatagaaggttctaagttg
gttgtctcaggtggatgtacagatgctggggtacttctcagtgacacctacttgttggat
ctcactatagacaagcctatatggagggagatcccaacttcttgggctcctccatctcga
ttagggcattcactctcagtttatggtcggacgaaaattcttatgtttggtggacttgcc
aagagtgggcacttacgactgagatcaggtgaggcctacaccattgacttggaggatgaa
gaaccacattggaggcaattggagtgtagtgcattaactggtatagggagccagagttct
gttgtcccccctcccagacttgatcatgttgctgttagcatgccctgtggaaggattata
atctttggtggttctattgctgggttgcactctccttcccagcttttcctgttagatcct
gctgaggagaaaccatcatggaggattctcaacgttcctggtcaaccacctaagcttgcg
tggggccatagcacctgtgtggttggagggacgagggtcctggtattgggagggcacact
ggggaggaatggatactaaacgaattgcatgagttgtgcttagcaagcaagcaagactta
gaacaaccatga
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