Populus nigra (Lombardy poplar): 133702605
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Entry
133702605 CDS
T10372
Name
(RefSeq) uncharacterized protein LOC133702605
KO
K14827
pre-rRNA-processing protein IPI1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133702605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnz03009
]
133702605
Ribosome biogenesis [BR:
pnz03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
133702605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
Cnd1
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
133702605
NCBI-ProteinID:
XP_061982898
LinkDB
All DBs
Position
9:complement(10843500..10854894)
Genome browser
AA seq
863 aa
AA seq
DB search
MAKTKGSSKKQQKRGIDFKKIKRKIGRKLPPPKNTTNTEIKSKAIVLPEQSVASEKAGLA
VSKKGLTLKELLQHTSHHNAKVRKDALMGMKDLFLNHPEELKLHRYAVIEKLRERISDDG
KTVRENLYQLLKSVILPGCKEDNQGLVISLMMAYIFNAMTHLAIDIRLMAFKFFDLAVEY
HPPSFFSYAEKILQNYEDILRKNQFYLEDKVKLKNALAGLVRCLLLLPSSKEVNLPAKNI
PEKKILQAFEPDVPTVFAEYSVIIKKLKDLVPVLVNCFQDFLPVLHDSLDAQSFDCMLNI
LQSIDLAVAFFIHGIQQGHPESPPLDQSFSSVLLKKLLVVFPLSPMHHLSEKDDDRYVLL
NIVITEIFMHLSEWICPPAVLFEKFLSFVEYVLLEKSCSNVRSNKAVREKQISTLIPFIP
KLVSRVIGNWKNRLLQAFTKTFQDCSPESSVKLACLAAIEEMIISHEDLLCTDVNDSGLF
DYKITWIRELPMLLILLGDRHSSSSKVVLHLLLRLGQRSLLYDDMQGLLKEFYSTDQDKG
NICYGPFLRLARDSQELSICCLYYFSQLDSTLLKSIASCCVCHELDPFMLFRIIEVLHST
YKAGHIQISDFISFLITLASRFKVFPENIFPATERDMKTSNHATFKSLISVVCSCLSQMG
DNSLVFVILEKVMLEQLSLKPPLDNSCAMLRMLIALDSKPTRLSEQSICSLSNVLSAYLI
DVAHCVLEDDDESMSSIHGQTRRYYLLPSFILFDRSHKLLNLVLNVMGSSINGRSFSLLS
GDRICYAKGSSSIINAIVSVLLWMQREAKVQQILYLYKEEIDHISRSICSLQSLEEINVP
IEERHIINRAIDRLKTLTSSLYQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaactaagggttcttccaagaagcagcaaaagcgtggaattgacttcaaaaaa
ataaagcgaaagatcggcaggaaattgccacctcctaagaatactactaatacagaaatt
aaatccaaagcaattgttcttccggagcagagtgtggcatcagagaaagcaggtttagct
gtgagcaagaaaggcttaactttgaaagagcttcttcaacatacatcccatcacaatgcg
aaagtccgtaaagatgccttgatgggcatgaaggatttattcctcaatcatccagaagag
cttaaattgcacagatatgctgttatagaaaaattacgtgaacggatcagtgatgatggg
aaaactgttcgagaaaacctttatcaacttcttaagtcagtgattttaccaggctgcaaa
gaggataatcagggacttgtcatttcgttaatgatggcttacatctttaatgcaatgaca
catttagcaattgacattcgacttatggcattcaaattttttgatctcgctgttgaatat
catcctccttcatttttctcatatgctgaaaagatacttcaaaattatgaagatattctt
cggaagaaccagttctatttagaagacaaagtcaagctgaagaatgctcttgctggtttg
gtgcgatgcttgttgctgttgccatctagtaaagaagttaacctgcctgcgaagaatatc
cctgagaaaaaaatattgcaggcttttgagcctgatgtgcctacagtatttgcagaatat
tccgtcatcatcaagaagctgaaagaccttgtaccagttttagtcaattgcttccaagat
tttctccctgtacttcacgactcactagatgcacaatcatttgattgcatgcttaacata
cttcagagcatagatcttgcagtcgcattctttatacatgggattcagcaaggtcatccc
gaatcaccacctcttgatcaaagcttctcatcagtattgttgaagaagttactagttgtg
tttcctctcagtccaatgcatcacctttcagaaaaggatgatgacagatatgttctcttg
aacattgtaattacagaaatatttatgcacttaagtgaatggatctgcccacctgctgtc
ttatttgagaaatttctatcatttgtggaatacgtgttgcttgaaaagagctgcagtaac
gtgcgatctaacaaagcagttcgagaaaagcagatatctacactgattccttttatccca
aaacttgtgtcacgggtgattggaaattggaagaatcgccttctccaggcatttacaaag
acattccaggattgcagtccagagtcttcagtaaaattagcttgccttgctgcaattgaa
gaaatgatcatttctcatgaagatctgctgtgcacagatgtcaatgattcaggactattt
gactacaagattacttggataagagagctgcctatgttgctcattctgctaggcgaccgg
cactcatcctcttccaaggttgtgttgcatcttctacttcgcctggggcaacgttcattg
ttgtatgatgatatgcaaggcttgctgaaagagttctacagcacagatcaagacaaaggg
aacatatgttatggtccttttttaaggctagccagggattcacaagaactctctatctgc
tgtctttattatttttctcaactggattcaactttgctgaagtcaattgcttcttgctgc
gtgtgtcatgagttggatccatttatgttattccggatcatagaggttttacattcaacc
tacaaagctggccacattcagatttctgacttcatcagcttcttaatcacgttggcttcg
cgtttcaaagtttttcctgaaaatatttttcctgccacggagagagatatgaagacctca
aatcatgcaacttttaaatcattgatcagtgttgtttgctcatgcctgtcgcagatgggt
gacaattctctagtttttgtgattctagagaaagtaatgctagagcagctatcattaaaa
ccacctctggacaattcttgtgctatgctcagaatgcttattgcactggattctaagccc
acaagactttctgaacaaagtatttgctctttaagcaatgtcctctcagcatatctcatt
gatgttgcacattgtgttctagaagatgatgatgagagcatgagctccatccatggacaa
acacgtcgttattatcttctgcctagctttatcctgtttgatagaagtcacaaacttctc
aatcttgtgttgaacgtgatggggtcatcgattaatggaagaagtttctcacttctatct
ggtgatcgtatctgttatgccaaggggagctcaagtattataaatgctattgtttctgtt
ttactatggatgcaaagggaagctaaggttcagcaaattctttatttatacaaggaagag
attgaccacatttcacgaagcatatgctctttacagtctttagaggaaatcaacgtgcca
atagaagaaagacacataataaaccgggcaattgatcgattaaagactctaacaagttca
ttatatcagtag
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