Populus nigra (Lombardy poplar): 133704311
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Entry
133704311 CDS
T10372
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
pnz Populus nigra (Lombardy poplar)
Pathway
pnz04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pnz00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133704311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pnz04121
]
133704311
Ubiquitin system [BR:
pnz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133704311
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS_3
NANM
PAS
F-box-like
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
133704311
NCBI-ProteinID:
XP_061985093
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Position
10:7460452..7464007
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AA seq
639 aa
AA seq
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MSKPQEEKYEEGEEFQSSGKRLKCAKSFKEKGKEEEEEEEEEEEELEREVSLMEDTRGGL
FFYPTNPTSFVVSDALELDFPIIYVNKVFQNFTGYQAHEVLGHNCRFLQYRDPHAQRRHP
LVDPVVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLVPIHDDDGAITHIIGIQVFS
EAKIDLNHVSYPVFKETCNQLSDQSANYSLPRGQSTFTGHPEICGILQLSDEVLAHNILS
RLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELT
TLEAVCWRKLTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEW
QRFSVKSSPPGRWGHTLSCLKGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTP
PLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYMLDLTTDKPMWREIPTSWAPPSRLGH
SLSVYDRTKILMFGGLANSGHLRLRSGEAYTIDLEDEEPQWRQLECSALTGIGNHSSVVP
PPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKFAWGH
STCVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSEP
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacctcaagaagaaaagtacgaggaaggagaagagtttcaaagctctggtaaa
aggctgaaatgcgccaaatccttcaaagaaaaagggaaggaggaagaggaggaagaagag
gaggaggaggaggaattggaaagagaggtttcattaatggaggacacaagaggagggttg
tttttctacccaacgaatcccacatcttttgtagtttcggatgctttagagcttgatttt
cctatcatttacgtcaacaaggtcttccagaacttcactggctatcaagctcacgaggtc
ctcggtcataactgtcggttcttacaatacagggatcctcatgctcaaagaaggcatcct
ttagtagatcctgttgttgtttctgaaatcagaagatgtcttgaggaaggggtggaattc
caaggtgaacttctaaactttaggaaggatggtactccattggtgaacaggctcagactt
gtacctatacatgacgatgacggagctatcacacacataattggtattcaggtattttca
gaagccaaaatagatctgaaccatgtatcatatccagtcttcaaagagacttgcaatcag
ctgtctgatcaatcggctaattattctcttccgcgtggacaatcaacattcactgggcat
ccagaaatatgtggaatacttcagttgtctgatgaagtattggctcataacattttatca
cgcttgacgccaagggatgttgcatccattggatctgtatgcagaagaatccggcaatta
acaaaaaatgagcatgtaaggaagatggtttgtcaaaatgcatggggaagagaagtcact
ggtgcattggagttgatgactaaaaagttgggctgggggcgtctggcaagggaactaact
acgcttgaggctgtgtgctggaggaaactgacagttggaggagctgttgagccttcacgc
tgcaatttcagtgcatgtgcagtaggaaatagacttgtattgtttggaggggaaggggta
aacatgcagccaatggatgacacgtttgttctcaatctggatgctgcaaatccagagtgg
cagcgttttagtgtgaaatcatccccaccagggcgctggggccacactctttcttgcctc
aagggttcctggttggtggtttttggaggatgtggtaggcaagggttgctcaatgatgtt
tttgtcctggacttggatgccaaacagcctacttggaaggaagtttctggcgggactccc
cctctacctagatcatggcatagctcttgcaccatagaaggttctaagctggttgtctca
ggcggatgtacagatgccggggtacttctcagtgacacctacatgttggatctcactaca
gacaagccgatgtggagagagatcccaacttcctgggcacctccatctcgattagggcat
tccctctcagtttatgatcggacaaaaattcttatgtttggtggacttgccaacagtgga
cacttacgactgagatcaggcgaggcctacaccattgacttggaggatgaagaaccgcaa
tggaggcaactggagtgcagtgcattaacaggcattgggaaccatagttctgttgtcccc
cctcccagactagatcatgttgctgttagcatgccctgtggaaggattataatctttggt
ggttccattgctgggctgcactctccttctcagcttttcctgttggatcctgctgaggag
aaaccatcatggaggattctcaatgttcctggtcagccaccaaagtttgcctggggtcat
agcacctgtgtggttggagggactagggtcctagtattgggggggcacactggggaggaa
tggatactaaacgaattgcatgagttgtgcttagcaagcaggcaagactcagaaccatga
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