Paenibacillus odorifer: PODO_27670
Help
Entry
PODO_27670 CDS
T03326
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pod
Paenibacillus odorifer
Pathway
pod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PODO_27670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pod03021
]
PODO_27670
03400 DNA repair and recombination proteins [BR:
pod03400
]
PODO_27670
Enzymes [BR:
pod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PODO_27670
Transcription machinery [BR:
pod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PODO_27670
DNA repair and recombination proteins [BR:
pod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PODO_27670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
PASTA
HHH_5
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
AIQ76680
UniProt:
A0A1R0Z8J2
LinkDB
All DBs
Position
complement(6144779..6145723)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEANDEGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVMEDVTEIILNLKALSLKIHSDEEKVFEIDAEGEGIVTAGDIRADSDVEI
LNPDLHIATLGPGARLHMRIFAGRGRGYVQADRNKRDDQPIGVIPVDSIYTPISRVNYGI
DNTRVGQVTNYDKLTLEIWTDGSIRPEEAVSLGAKILNEHLVLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaaatcgaaaagccgaagattgagaccgtagaagctaatgatgaaggtacctat
gggaaattcgtagttgaaccgctggaacgtgggtatggcacgactctggggaactcgctt
cgccggatattgctttcttcgcttccaggagccgcagtgacttcggtccaaattgacggc
gttctgcatgagttctcgaccgttccaggcgtaatggaagatgtgacggaaatcattctg
aaccttaaagccttgtctctgaagattcattcagacgaggaaaaagtgttcgagattgat
gctgaaggggaaggcatcgttaccgcaggtgatatccgtgcggacagcgatgttgagatc
ctcaatccggatcttcacattgcaacgctgggacctggtgcgagacttcatatgcgtatt
tttgcaggccgtggtcgcggctatgtccaagcggaccggaacaaacgtgacgatcagcca
attggtgttattccagttgactccatctatactccaatttcacgcgttaactacggcata
gacaatacacgtgttggtcaagtgactaactacgacaaattgacgcttgaaatttggacg
gatggaagtatcagaccggaagaggctgtaagcctcggagccaaaattttgaacgagcac
ctcgttctgttcgtaggtcttacggacgaagcgaaagacgccgaaattatggttgaaaaa
gaagaagacaaaaaagaaaaagtacttgagatgacaatcgaagagcttgatctttctgtt
cgttcctacaactgcctcaaacgtgctggtattaataccgtacaagagcttaccacgaag
actgaagaagatatgatgaaggtgcgtaaccttggtcgtaaatctttggaagaagttcag
gaaaagcttgaggaacttggtttgggtctccgcacagaagaatag
DBGET
integrated database retrieval system
