Metapseudomonas otitidis: PtoMrB4_21810
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Entry
PtoMrB4_21810 CDS
T06890
Symbol
dhcR
Name
(GenBank) transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
poj
Metapseudomonas otitidis
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
poj03000
]
PtoMrB4_21810 (dhcR)
Transcription factors [BR:
poj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PtoMrB4_21810 (dhcR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HTH_23
PBP_like
LNP1
Motif
Other DBs
NCBI-ProteinID:
BCA28204
UniProt:
A0A679GQ80
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Position
complement(2379987..2380898)
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AA seq
303 aa
AA seq
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MTVKQLRAFLAVAQSLSFAQACERLHLSQPALSLAIKTLEESLGGQLLVRTTRSVALTPE
GETLLPIARRLLADWDDAEELLHQHFTLQLGKVAIAAMPSFASNLLPVALKAFRDRHPKV
NVAVHDVINEQVLEMVRSHRVELGIAFEPSSLEGLAFTPFYSDRFVAVVPAGCALAERDT
VSWAELLGEPFITLQRPSAVRLLLEDSVAARHGHLPVAFESHQLVTVGRMVAQGLGVSAV
PSLCIQQMEELGARCVPLDTPQVERRVGLLRLASHQLSTAAQALADVLLHLRDWEHQLTP
ARP
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcaagcaactgcgtgccttccttgccgtcgcccagagcctgagcttcgcccag
gcctgcgaacgcctgcacctgtcccagccggccctctccctggcgatcaagaccctggag
gaatccctcggcgggcagttgctggtgcgcaccacccgcagcgtcgccctcacacccgag
ggcgagaccctgctgcccatcgcccggcgcctgctggccgactgggacgacgccgaagag
ctgctgcaccagcacttcaccctgcaactgggcaaggtcgccatcgccgccatgccctcc
ttcgccagcaacctgctgccggtggcgctgaaggcgttccgcgaccgccacccgaaggtg
aacgtcgccgtgcacgacgtgatcaacgaacaggtactggaaatggtgcgcagccaccgc
gtggaactgggcatcgccttcgagccgtcgagcctggaaggcctggccttcacccccttc
tacagcgaccgcttcgtcgccgtggtgccggccggctgcgcgctggccgaacgcgacacg
gtgagctgggcggagctgctgggcgagcccttcatcaccctgcaacgcccctcggccgtg
cgcctgctgctggaagacagcgtcgccgcccgccacggccacctgcccgtcgccttcgaa
agccaccaactggtcaccgtcggccgcatggtcgcccagggcctgggcgtcagcgccgtc
cccagcctgtgcatccagcagatggaagaactgggcgcccgctgcgtccccctcgacacc
ccgcaagtggaacgccgcgtcggcctgctgcgcctcgccagccaccaactctccaccgcc
gcccaggccctggccgacgtcctgctgcacctgcgcgattgggaacaccagttgacccca
gcgcgcccataa
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