Pseudomonas otitidis: PtoMrB4_36830
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Entry
PtoMrB4_36830 CDS
T06890
Symbol
ldcA
Name
(GenBank) lysine-specific pyridoxal 5'-phosphate-dependent carboxylase LdcA
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
poj
Pseudomonas otitidis
Pathway
poj00330
Arginine and proline metabolism
poj01100
Metabolic pathways
poj01110
Biosynthesis of secondary metabolites
Module
poj_M00133
Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine
Brite
KEGG Orthology (KO) [BR:
poj00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PtoMrB4_36830 (ldcA)
Enzymes [BR:
poj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
PtoMrB4_36830 (ldcA)
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Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Colicin-DNase
Motif
Other DBs
NCBI-ProteinID:
BCA29706
UniProt:
A0A679GF83
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Position
complement(4019423..4021705)
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AA seq
760 aa
AA seq
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MDPPYRDVLMYKDLKFPILIVHRDIKADTVAGERVRGIAHELERDGFVILSTASSAEGRI
VASTHHGLACILVAAEGAGENQRLLHDVVELIRVARVRAPQLPIFALGEQVTIENAPAEA
MADLNQLRGLLYLFEDTVPFLARQVARAARTYLEGLLPPFFRALVEHTAQSNYSWHTPGH
GGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADH
TFFVINGTSTANKIVWHSMVGRDDLVLVDRNCHKSILHSIIMTGAIPLYLMPERNELGII
GPIPLSEFSRESIQAKIDASPLARGREPKVRLAVVTNSTYDGLCYNAELIKQTLGDSVEV
LHFDEAWYAYAAFHEFYAGRYGMGTARGAGGPLVFTTHSTHKLLAAFSQASMIHVQDGET
RQLDRDRFNEAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALAN
VGQNLAEDDWWFSIWQPPKVEGRDQVSTPDWLLQPQADWHGFGEVADDYVLLDPIKVTLV
MPGLTADGRLGERGIPAAVVGKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELL
EFKRLYDANAPLITALPSIARAGGARYQGLGLRDLCDELHGCYRDNGTARAMRRMYTTLP
VAAMKPADAYDKLVRGDVEAVPLDALQGRIAAVMLVPYPPGIPLIMPGERFTEETRSIID
YLAFARTFDESFPGFDSDVHGLQQQDTPQGRCYTVDCIKE
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggacccgccgtaccgggacgtcctcatgtacaaagacctgaagttccccatcctcatc
gtccaccgcgatatcaaggccgataccgtcgcgggggagcgcgtgcgcggcatcgcccac
gaactggagcgggacggtttcgtcatcctctccaccgccagttccgccgaggggcgcatc
gtcgcctccacccaccatgggctggcctgcatcttggtggccgcggagggcgccggggag
aaccagcgcctgctgcatgacgtggtcgaactgatccgcgtcgcccgggtgcgagcgccg
caattgccgatcttcgccctgggtgaacaggtcaccatcgagaacgcccccgctgaggcg
atggccgacctcaaccagctgcgcggcttgctgtacctgttcgaagacaccgtgccgttc
ctcgcgcgccaggtggcgcgggctgcgcgcacctacctggaggggttgctgccgccgttc
ttccgcgcgctggtggagcacaccgcgcagtccaactattcctggcatacgcccggccac
ggcggtggcgtggcctaccgcaagagcccggtggggcaggccttccaccagttcttcggc
gagaacaccctgcgttccgacctctcggtgtcggtgcccgaactgggctcgctgctggat
cacaccgggccgctggccgaggcagaggcgcgggcggcgcggaacttcggcgcggaccac
accttcttcgtcatcaacggcacctccaccgccaataagatcgtctggcactccatggtc
ggccgcgatgacctggtactggtggaccgcaactgccacaagtcgatcctccactcgatc
atcatgaccggcgccatcccgctgtacctgatgccggagcgcaacgagctgggcatcatc
ggcccgatccccctgagcgaattcagccgcgaatcgatccaggcgaagatcgacgccagc
ccgctggcccgcggacgcgagccgaaggtgcgcctggcggtggtgaccaactccacctac
gacgggctctgctacaacgccgagctgatcaagcagaccctgggcgacagcgtcgaggtg
ctgcacttcgacgaggcctggtacgcctacgcggccttccacgagttctacgccggccgc
tacggcatgggcaccgcgcgaggggcgggcggcccgctggtgttcaccacccactccacc
cacaagctgctggcggccttcagccaggcctcgatgatccacgtgcaggacggcgagacc
cgccagctggaccgtgatcgcttcaacgaggcgttcatgatgcacatctccacctcgccc
cagtacgggatcatcgcctcgctggacgtggcctccgccatgatggaaggccccgccggg
cgctcgctgatccaggaaaccttcgacgaggccctgagcttccgccgtgccttggccaac
gtcgggcagaacctggccgaggacgactggtggttcagcatctggcagccaccgaaggtg
gaagggcgcgaccaggtcagcacccccgattggctgttgcagccccaggccgattggcac
ggcttcggcgaggtagccgacgactacgtgctgctcgacccgatcaaggtcaccctggtg
atgccgggcctgactgccgacgggcgtttgggcgaacgcggcattccggcggcggtggtc
ggcaagttcctctgggagcgcgggctggtggtggagaagaccggcctgtattccttcctg
gtgctgttctccatgggcattaccaagggcaagtggagcacgttgctcaccgagttgctg
gagttcaaacggctctacgacgccaacgcgccgctgatcaccgccttgccgtccatcgcc
cgtgccggcggtgcccgctaccaagggctcggcctgcgtgacctgtgcgatgaactccac
ggctgctaccgcgacaacggcaccgcgcgggcgatgcggcgcatgtacaccaccctgccg
gtggccgccatgaaaccggcggacgcctacgacaagctggtgcgcggcgacgtggaggcg
gtgccgctggatgcgctgcaagggcgcatcgcggcggtgatgctggtgccttatccgccg
ggcatcccgctgatcatgccgggggagcgcttcaccgaagagacccgctcgatcatcgat
tacctggccttcgcccggacattcgacgagtccttccccggtttcgactccgatgtgcac
ggcctgcagcagcaggacaccccgcagggccgctgctataccgttgattgcatcaaggag
tga
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