Polaribacter sp. MED152: MED152_13074
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Entry
MED152_13074 CDS
T02533
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pom
Polaribacter sp. MED152
Brite
KEGG Orthology (KO) [BR:
pom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pom03016
]
MED152_13074
Enzymes [BR:
pom01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
MED152_13074
Transfer RNA biogenesis [BR:
pom03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
MED152_13074
Prokaryotic type
MED152_13074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_4
Lactamase_B
PDEase_II
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
EAQ40971
LinkDB
All DBs
Position
complement(2872532..2873455)
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AA seq
307 aa
AA seq
DB search
MSINLTILGCHSATPRVNAYPTSQYLEINNRHFLIDCGEGTQRQMRKYKVGFSKINHIFI
SHLHGDHFYGLVGLLSTYGILSREKELHVYGPKGIKEVTLLQLKISQSHAKYDIIFHELS
SKKSELIFEDDKVSVTTIPLNHRVYTNGYLFKEKEKPKKLHMGNISNYDEIGRADYLNIK
AGKDITLTSGEIVPNDELTLPPKKALSYAFCSDTIFKPDIVPIIKEVDLLYHEATFLADR
EDLAKKTKHATSKQAAQIAKEANAKQLVVGHYSGRYKDISLFQKEAQEVFKNTELAEPGK
KFNIDAE
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaacctaactattttaggttgtcattcagcaactccgcgtgtaaacgcatac
ccaacatctcagtatttagaaattaataatcgtcactttttaattgattgtggagaaggc
actcaacgtcaaatgcgaaagtataaagtgggcttttctaaaataaaccacatttttata
tcacatttacatggtgatcatttttatggcttggtaggcttattgtctacttatggcata
ttaagcagagaaaaagaactgcatgtatatggcccaaaaggaattaaagaagttacgtta
ttgcaattaaaaatttctcaatcacatgcaaaatatgacattatttttcatgaactatct
tctaaaaaaagtgaactaatttttgaagatgacaaagtttctgtaactacaattccttta
aatcatagagtgtataccaatggatatctatttaaagagaaagaaaaacctaaaaaattg
cacatgggtaatatttctaattatgatgagattggtagagcagattatttaaatattaaa
gctggtaaagacattactttaacttctggtgaaattgtacctaatgatgaattaactctg
cctccaaaaaaagctttaagttatgctttttgcagtgacacaatatttaagccagatatt
gtgccaattataaaggaagtagatttattatatcatgaagctacctttttagcagacaga
gaagatttagcgaaaaaaacaaaacatgcaacctcgaaacaagctgctcagatagctaaa
gaggcaaatgcaaagcaattggtagttggacattattctggacgatataaagacatctct
ttgtttcaaaaagaagctcaagaagtatttaaaaatactgaattagctgaaccaggtaaa
aaattcaatatagatgcagaataa
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