KEGG   Pongo abelii (Sumatran orangutan): 100171527
Entry
100171527         CDS       T01416                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pon  Pongo abelii (Sumatran orangutan)
Pathway
pon03013  Nucleocytoplasmic transport
pon05014  Amyotrophic lateral sclerosis
pon05164  Influenza A
Brite
KEGG Orthology (KO) [BR:pon00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100171527 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    100171527 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100171527 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pon03019]
    100171527 (RAE1)
   03036 Chromosome and associated proteins [BR:pon03036]
    100171527 (RAE1)
Messenger RNA biogenesis [BR:pon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100171527 (RAE1)
Chromosome and associated proteins [BR:pon03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    100171527 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 WDR55 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_WDR41 WDR90_beta-prop_4th ExoI_SH3 PepSY
Other DBs
NCBI-GeneID: 100171527
NCBI-ProteinID: NP_001124680
Ensembl: ENSPPYG00000011159
UniProt: Q5RF99 A0A2J8TXI7
LinkDB
Position
21:61746676..61774713
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagcctgtttggaacaacctcaggttttggaaccagtgggaccagcatgtttggcagc
gcaaccacagacaatcacaatcctatgaaggatattgaagtaacatcatctcctgatgat
agcattggttgtctatcttttagcccaccaaccttgccggggaactttcttattgcagga
tcatgggctaatgatgttcgctgctgggaagttcaagacagtggacagactattccaaaa
gcccaacagatgcacactgggcctgtgctcgatgtctgctggagtgacgatgggagcaaa
gtatttacggcatcgtgtgataaaactgccaaaatgtgggacctcagcagtaaccaagcg
atacagattgcacagcatgatgctcctgttaaaaccatccattggatcaaagctccaaac
tacagctgtgtgatgactgggagctgggataagactttaaagttttgggatactcgatcg
tcaaatcctatgatggttttgcaactccctgaaaggtgttactgtgctgacgtgatatac
cccatggctgtggtggcaactgcagagaggggcctgattgtctatcagctagagaatcaa
ccttctgaattcaggaggatagaatctccactgaaacatcagcatcggtgtgtggctatt
tttaaagacaaacagaacaagcctactggttttgccctgggaagtatcgaggggagagtt
gctattcactatatcaaccccccgaaccccgccaaagataacttcacctttaaatgtcat
cgatctaatggaaccaacacttcagctcctcaggacatttatgcggtcaatggaatcgcc
ttccatcctgttcatggcacccttgcaactgtgggatctgatggtagattcagcttctgg
gacaaagatgccagaacaaaactaaaaacttcggaacagttagatcagcccatctcagcc
tgctgtttcaatcacaatggaaacatatttgcgtacgcttccagctacgactggtcaaag
ggacatgaattttataatccccagaaaaaaaattacattttcctgcgtaatgcagccgaa
gagctaaagcccaggaataagaagtag

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