Pongo abelii (Sumatran orangutan): 100431991
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Entry
100431991 CDS
T01416
Symbol
COL9A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04151
PI3K-Akt signaling pathway
pon04510
Focal adhesion
pon04512
ECM-receptor interaction
pon04820
Cytoskeleton in muscle cells
pon04974
Protein digestion and absorption
pon05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100431991 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100431991 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100431991 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100431991 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100431991 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100431991 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pon00535
]
100431991 (COL9A3)
Proteoglycans [BR:
pon00535
]
Extracellular matrix (ECM) proteoglycans
Others
100431991 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100431991
NCBI-ProteinID:
XP_024094699
Ensembl:
ENSPPYG00000037415
LinkDB
All DBs
Position
21:67251868..67276639
Genome browser
AA seq
684 aa
AA seq
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MARPPAFARLLLLLLLGELLAAAGAQKVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP
PGPKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP
GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP
GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEA
GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGSMGDPGLPGPQ
GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ
GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG
ICDTSACQGAVLXGVGEKSGSRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcccggccgcccgcgttcgcccggctcctgctcctgctcctgctcggggagctcctg
gcggccgccggggcgcagaaagtgggactcccaggcccccccggccccccagggccgccc
gggaagcccggccaggacggcattgacggagaagctggtcctccaggtctgcctgggccc
ccgggaccgaagggggccccaggaaagccggggaaaccaggagaggccgggctgccggga
ctgccgggtgtggatggtctgactgggcaagatggaccccctggacccaagggtgcccct
ggggaacggggaagtctgggacccccggggccgcccgggctggggggcaaaggcctccct
ggaccccccggagaggcaggagtgagcggccccccaggtgggatcggcctccgcggcccc
ccgggaccttctggactccccggcctccctggccccccaggacctcccggaccccctgga
cacccaggagtcctccctgaaggcgctactgaccttcagtgcccaagtatctgcccgcca
ggtcccccagggccccctggaatgccagggttcaagggacccactggctacaaaggcgag
cagggggaagtcggcaaggacggcgagaagggtgaccctggccccccggggcccgccggc
ctcccgggcagtgtggggctgcagggcccccggggattacgaggactgccagggccactt
gggccccctggggaccggggtcccatcgggttccgagggccacctgggatcccaggagca
cctgggaaagcgggtgaccgaggcgagaggggcccagaagggttccgcggccccaagggt
gacctcggcagacctggtcccaagggaacccccggagtggccgggccaagcggagagccg
ggcatgccgggcaaggacggccagaatggcgtgccaggactcgatggccagaagggagag
gctggtcgcaacggtgccccgggagagaagggccccaacgggctgccgggcctccccgga
cgagcgggatccaaaggcgagaagggagaactgggcagagctggggagctgggtgaggct
ggcccctcaggagagccaggcgtccctggagatgctggcatgcctggggagcgtggtgag
gctggccaccggggctcagcgggcgccctcggcccacaaggccctcccggagcccctggt
gtccgaggcttccagggccggaagggcagcatgggagaccctggccttccaggaccccag
ggcctccgaggtgacgtgggtgaccggggtccgggaggtgccgcaggccctaagggagac
cagggtattgcaggttccgacggtcttcctggggataaaggagaactgggtcccagcggc
ctggtcggacccaaaggagagtctggcagtcgaggggagctgggccccaaaggcacccag
ggtcccaacggcaccagcggtgttcagggtgtccccgggccccccggtcctctgggcctg
cagggtgtcccgggtgttcctggcatcacggggaagccgggagttccggggaaggaggcc
agcgagcagcgcatcagggagctgtgtggggggatgatcagcgaacaaattgcacagtta
gccgcgcacctaaggaagcctttggcacccgggtccattggccggcccggtccagctggc
ccccctggacccccaggacccccaggctccattggtcaccctggcgctcgaggacccccc
ggataccgcggtcccactggggagctgggagaccctgggcccagaggaaaccagggcgac
agaggagacaaaggcgcggcaggagcagggctggacgggcctgaaggagaccaggggccc
caaggaccccaaggtgtgcccggcaccagcaaggacggccaggatggtgctcccggcgag
cctgggcctcccggagatcctgggcttccaggtgccattggggcccaaggaacaccgggg
atctgcgacacctcagcctgccaaggagccgtgttancaggggttggggaaaaatcaggc
tctagaagctcataa
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