Pongo abelii (Sumatran orangutan): 100436774
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Entry
100436774 CDS
T01416
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X4
KO
K14966
host cell factor 1
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03083
Polycomb repressive complex
pon04980
Cobalamin transport and metabolism
pon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100436774 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
100436774 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100436774 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pon01009
]
100436774 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100436774 (HCFC1)
03029 Mitochondrial biogenesis [BR:
pon03029
]
100436774 (HCFC1)
Protein phosphatases and associated proteins [BR:
pon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100436774 (HCFC1)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
100436774 (HCFC1)
HMT complexes
COMPASS/SET1 complex
100436774 (HCFC1)
MLL-HCF complex
100436774 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100436774 (HCFC1)
Mitochondrial biogenesis [BR:
pon03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
100436774 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_1
Kelch_4
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
100436774
NCBI-ProteinID:
XP_002832332
Ensembl:
ENSPPYG00000020863
UniProt:
A0A6D2XD81
LinkDB
All DBs
Position
X:complement(149222254..149246997)
Genome browser
AA seq
2034 aa
AA seq
DB search
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIDTL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPSRVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAPAPPTTTTIQVLPTVPGSSISVPTAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTMAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSATNTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAGGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEAAASLVTSTVGQQNGSVVRVCSNPPC
ETHETGTTNTATTATSNMAGQHGCSNPPCETHETGTTNTATTAMSSVGANHQRDARRACA
AGTPAVIRISVATGALEAAQGSKPQCQTRQTSATSTTMTVMATGAPCSAGPLLGPSMARE
PGGRGPTFVQLAPLSSKVRLSSPGSKDLPAGRHSHAVNTAAMTRSSMGAGEPRLAPVCES
LQSGSPSATVTVTALEALLCPSATVTQVCSNPPCETHETGTTNTATTSNAGSAQRVCSNP
PCETHETGTTHTATTATSNGGTGQPEGGQQPPAGRPCETHQTTSTGTTMSVSVGALLPDA
TSSHRTVESGLEVAAAPSVTLQAGTALLAPFPTQRVCSNPPCETHETGTTHTATTVTSNM
SSNQDPPPAASDQGEVESTQGDSVNITSSSAITTVSSTLTRAVTTVTQSTPVPGPSVPPP
EELQVSPGPRQQLPPRQLLQSASTALMGESTEVLSASQTPELPAAVDLSSTGEPSSGQES
ASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAEAA
AQAAATEEAQALAIQAVLQAAQQAVMGTGEPMDTSEAAATVTQAELGHLSAEGQEGQATT
IPIVLTQQELAALVQQQQLQEAQAQQQHHHLPTEALAPADSLNDPAIESNCLNELAGTVP
STVALLPSTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLPPPP
SKAPMKKENQWFDVGVIKGTNVMVTHYFLPPDDAVPSDDDSGTVPDYNQLKKQELQPGTA
YKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKII
EYSVYLAIQSTQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPAIIF
RIAARNEKGYGPATQVRWLQETSKDSSGTKPANKRPMSSPEMKSAPKKSKADGQ
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggccgtgtcgcccgccaactcgccagcggtgctcctgcagccccgctggaag
cgagtggtgggctggtcgggtccggtgccacggccccgccacggccaccgcgccgtggcc
atcaaggagctcatcgtagtgtttggcggcggcaacgagggaatagtggacgaactgcac
gtgtacaacacggcaaccaaccagtggttcatcccagccgtgaggggggacattccccct
gggtgtgcagcctatggcttcgtgtgtgacgggactcgcctcctggtgtttggcgggatg
gtggagtatgggaaatacagcaatgacctctatgagctccaggcgagccggtgggagtgg
aagagactcaaagcaaagacgcccaaaaacgggccccctccgtgtcctcgactcgggcac
agcttctcccttgtgggcaacaaatgctacctgtttgggggtctggccaatgatagcgag
gacccaaagaacaacattccgaggtacctgaatgacttatatatcctggaattacggcca
ggctccggagtggtagcctgggacattcctatcacttacggggtcctaccaccaccccgg
gagtcacatactgccgtggtctacaccgaaaaagacaacaagaagtccaagctggtgatc
tacggtgggatgagtggctgcaggctgggggacctgtggaccctagatattgacaccctg
acgtggaataagcccagtctcagcggggtggcgcctcttcctcgcagtctccactcggca
accaccatcggaaataaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacacgctggcttgtctcaac
ctggataccatggcctgggagaccatcctgatggatacactggaggacaacatcccccgc
gctcgggctggccactgcgcagtcgccatcaacacccgcctgtacatttggagtgggcgt
gacggctaccgcaaggcctggaacaaccaggtctgctgcaaggacctctggtacctagag
acagaaaagccaccacccccatcccgagtacaactggtacgcgccaacaccaactccctg
gaggtgagctggggggcagtggcaacagccgacagctaccttctccagctccagaaatat
gacattcctgccacggctgctactgccacctcccctacacccaatccggtcccatctgtg
cctgccaaccctcccaagagccctgccccagcagcagccgcacctgctgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgcccccgcacccccgaccaccaccacc
atccaggtcttgccgacggtgcctggcagctccatttctgtgcccaccgcagccaggact
caaggtgtccctgctgttctcaaagtgaccggtcctcaggctacaacaggaactccattg
gtcaccatgcgacctgccagccaggctgggaaagcccctgtcaccgtgacctccctgccc
gccggagtgcggatggttgtgccaacgcagagtgcccagggaacggtgattggcagtagc
ccacagatgagtgggatggccgcgctggccgctgcggccgctgccacccagaagatcccc
ccttcctcggcacccacggtgctgagtgtcccagcgggtaccaccatcgtgaagaccatg
gctgtgacacctggcactaccaccctcccagccactgtgaaggtggcctcctcgccagtc
atggtgagcaaccctgccactcgcatgctgaagactgcagccgcccaggtggggacatcg
gtttcctccgccaccaacacgtctacccgccctatcatcacagtgcacaagtcaggcact
gtgacagtggcccagcaagcccaggtggtgaccacagtcgtgggcggggtcaccaagacc
atcaccctggtgaagagccctatctctgtcccaggaggcagcgctctgatttccaatctg
ggcaaagtgatgtcggtggtccagaccaaaccagttcagacttcagcggtcacaggccag
gcgtccacgggtcctgtgactcagatcatccagaccaaagggcccctgccagcgggaaca
atcctgaagctggtgacctcagcagatggcaagcccaccaccatcatcactaccacgcag
gccagtggggcggggaccaagcccaccatcctgggcatcagcagcgtctcccccagtacc
accaagcccggcacgaccaccatcatcaaaaccatccccatgtcggccatcatcacccag
gcgggtgccacgggtgtgaccagcagtcctggcatcaagtcccccatcaccatcatcacc
accaaggtgatgacttcaggaactggagcacctgccaaaatcatcactgctgtccccaaa
attgccactggccacgggcagcagggagtgacccaggtggtgcttaagggggccccggga
cagccaggcaccatcctccgcactgtgcccatggggggtgttcgcctggtcacacctgtc
accgtctccgccgtcaagccagccgtcaccacgttggttgtgaaaggcaccacaggtgtc
acaaccctaggcacagtgacaggcaccgtctccaccagccttgccggggcagggggccac
agcaccagtgcttccctggccacgcccatcaccaccttgggcaccatcgccaccctctca
agccaggtgatcaaccccactgccatcactgtgtcggccgcacagaccacgctgacagcg
gcaggcgggctcacgaccccgaccatcaccatgcagcccgtgtcccagcccacccaggta
actctgatcacggcacctagtggggtggaggcccagcctgtgcatgacctccctgtgtcc
atcctggcctccccaactacagagcagcctaccgccacagttaccatcgccgactcaggc
cagggtgatgtgcagcctggcactgtcaccttggtgtgctccaaccccccctgtgagacc
cacgagactggcaccaccaacacggccaccaccactgttgtggctaaccttgggggacac
ccccagcccacccaagtgcagttcgtctgtgacagacaggaggcagctgcttctcttgtg
acctcgactgtggggcagcagaatggtagcgtggtccgagtctgttcgaacccaccctgc
gagactcacgagacgggcaccaccaacaccgccaccaccgccacctccaacatggccggg
cagcatggctgctcaaacccaccctgcgagacccacgagacgggcaccaccaacactgcc
actacagccatgtcgagcgtcggcgccaaccaccagcgagatgcccgtcgggcctgtgca
gctggcacccctgctgtgatccggatcagtgtggccactggggcgctggaggcagcccag
ggctctaagccccagtgccaaacccgccagaccagcgcgaccagcaccaccatgactgtg
atggccactggggccccgtgctcggctggcccactccttgggccaagcatggcacgggag
cccgggggccgcggccctacttttgtgcagttggcccctctgagcagcaaagtcaggctg
agcagcccaggcagcaaggacctgcccgcggggcgccacagccatgcggtcaacaccgct
gccatgacccgttccagcatgggtgctggggagccccgcttggcacctgtgtgcgagagc
ctccagagtggctcgcccagcgccacagtgactgtgacagccctggaggcactgctgtgt
ccctcggccaccgtgacccaagtctgctccaacccaccatgtgagacccacgagacaggc
accaccaacaccgccactacctcgaatgcaggcagcgcccagagggtgtgctccaacccg
ccatgcgagacccacgagacgggcaccacccacacggccaccaccgccacttcaaacggg
ggcacgggccagcccgagggtgggcagcagccgcctgctggtcgcccctgtgagacacac
cagaccacttctactggcaccaccatgtcggtcagcgtgggtgccctgcttcccgacgcc
acttcttcccacaggaccgtggagtctggcctagaggtggcggcggcacccagcgtcacc
ctccaggctggcactgcgctgctggctcctttcccaacacagagggtgtgctccaacccg
ccctgtgagacccacgagacgggcaccactcacacggccaccactgtcacttccaacatg
agttcaaaccaagaccccccacctgctgccagtgatcagggagaggtggagagcacccag
ggcgacagcgtgaacatcaccagctccagtgccatcacaactgtgtcctccacactgacg
cgggctgtgaccaccgtgacgcagtccacaccggtcccgggcccctccgtgccgccccca
gaggaactccaggtgtcgccagggcctcgccagcagctgccgccacggcagcttctgcag
tcggcttccacagccctgatgggggagtccaccgaggtcctgtcagcctcccagacccct
gagctcccggccgccgtggatctgagcagcacaggggagccatcttcgggccaggagtct
gccagctctgcggtggtggccactgtggtggtccagccacccccacccacgcagtccgaa
gtagaccagttatcacttccccaagagctaatggctgaggcccaagccggcaccaccacc
ctcatggtaacggggctcacccccgaggagctggcagtgactgctgctgcagaagcagct
gcccaggctgcagctacggaggaagcccaggccctggccatccaggcagtgctccaggcc
gcgcagcaggccgtcatgggcaccggtgagcccatggacacctccgaggcagcagcaacc
gtgactcaggcggagctggggcacctgtcggctgagggtcaggagggccaggccaccacc
atccccattgtgctgacacagcaggagctggctgccctggtgcagcagcagcagctgcag
gaggcccaggcccagcagcagcatcaccacctccccactgaggccctggcccctgccgac
agtctcaacgacccggccattgagagcaattgcctcaatgagctggccggcacggtcccc
agcactgtggcgctgctgccctcaacggccactgagagcctggctccatccaacacattt
gtggccccccagccggttgtggtagccagcccagccaagctgcaggctgcagctaccctg
actgaagtggccaatggcatcgagtccctgggtgtgaagccagacctgccgcccccaccc
agcaaagcccccatgaagaaggaaaaccagtggtttgatgtaggggtcattaagggcacc
aatgtaatggtgacacactatttcctgccaccagatgatgctgtcccatcagacgacgat
tcgggcaccgtccctgattataaccagctgaagaagcaggagctgcagccaggcacagcc
tataagtttcgtgttgccggaatcaatgcctgtggccgggggcccttcagcgaaatctca
gcctttaagacgtgcctgcctggtttcccaggggccccttgtgccattaaaatcagcaaa
agtccggatggtgctcacctcacctgggagccaccctctgtgacctccggcaagattatc
gagtactccgtgtacctggccatccagagcacacaggctgggggcgagctgaagagctcc
accccggcccagctggccttcatgcgggtgtattgcgggcccagcccctcctgcctggtg
cagtcgtccagcctctccaacgcccacattgactacaccaccaagcccgccatcatcttc
cgcatcgccgcccgcaatgagaagggctatggcccggccacacaagtgaggtggctgcag
gaaaccagtaaagacagctctggcaccaagccggccaacaagcggcccatgtcctctcca
gaaatgaaatctgctccaaagaaatctaaggccgatggtcagtga
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