Pongo abelii (Sumatran orangutan): 100442808
Help
Entry
100442808 CDS
T01416
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
100442808 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pon03036
]
100442808 (ERCC6)
03400 DNA repair and recombination proteins [BR:
pon03400
]
100442808 (ERCC6)
Chromosome and associated proteins [BR:
pon03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
100442808 (ERCC6)
DNA repair and recombination proteins [BR:
pon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
100442808 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100442808
NCBI-ProteinID:
XP_024109702
Ensembl:
ENSPPYG00000002254
LinkDB
All DBs
Position
10:complement(47298477..47381381)
Genome browser
AA seq
1500 aa
AA seq
DB search
MPNEGIPHSSQSQEQDCLQSQPVSNNEEMAIKQESGGDGEMEEYLPFCSVGDGLSTSAVG
CASAAPRRGPALLHIDRHQIQAVEPSAQALELQGLGVDVYDQDVLEQGVLQQVDNAIHEA
SRGSQLADVEKEYRSVLDDLTSCTTSLRQINKIIEQLSPQAATSRDINRKLDSVKRQKYN
KEQQLKKITAKQKHLQAILGGAEVKIELDHASLEEDAEPGPSSLGSMLMPVQETAWEELI
RTGQMTPFGTQIPQKQEKKPRKIMLNEASGFEKYLADQAKLSFERKKQACNKRAARKAPA
PVTPPAPVQNKNKPNKKARVLSKKEERLKKHIKKLQKRALQFQGKVGLPKARRPWESDMR
PEAEGDSEGEESEYFPTEEEEEEEDEEVEGVEADLSGDGTDYELKPLPKGRKRQKKVPVQ
EIDDDFFPSSGEEAEASSVGEGGGGGRKVGRYRDDGDEDYYKQRLRRWNKLRLQDKERRL
KLEDDSEESDAEFDEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTI
QIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHET
GSYTHKKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTL
ACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNAS
SVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFV
DSKEVYRILNGEMQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGK
MIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITR
YNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVY
RLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYELFTLTSPDASQSTETSA
IFAVVFFLFTGTGSDVQTPKCHLKRRIQPAFGADCDVPKRKKFPASNISVNDATSSEEKS
EAKGAEVNAVTSNQSGPLKDDPYMSSNVTSNDRLGEETNAVSGPEELSVISGNGECSNSS
GTGKTSRPSGDESIDEKLGLSSKRERPSQAQTESFSENKQMENNFYKHKSKTKHHSVAEE
ETLEKYLRPKQKPKNSKHCRDAKFEGTRIPHLVKKRRYQKQDSENKSEAKEQSNDDYVLE
RLFKKSVGVHSVMKHDAIMDGASPDYVLVEAEANRVAQDALKALKLSRQRCLGAASGVPT
WTGHRGISGAPAGKKSRFGKKRNSNFSVQHPSSTSPTEKCQDGIMKKEGKDNVPEHFSGR
AEDADSSSGALASSSLLAKMRARNHLILPERLESESGHLQEASAVLPTTEHDDLLVEMRN
FIAFQAHTDGQASTREILQEFESKLSASQSCVFRELLRNLCTFHRTSGGEGIWKLKPEYC
NT seq
4503 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatgagggaatcccccactcaagtcaatctcaggagcaagactgtttacagagt
cagcctgtcagtaataatgaagaaatggcaatcaagcaagaaagtggtggtgatggggag
atggaggagtacctgcccttttgttccgtgggtgacgggctgtccacctctgctgtgggg
tgcgcatcagcagctccgaggagagggccagccctgctgcacatcgaccgacatcagatc
caggcggtagagcctagcgcccaggcccttgagctgcagggtttgggtgtggacgtctat
gaccaggacgtgctggaacagggtgtgcttcagcaggtggacaatgccatccatgaggcc
agccgtggctcccagctcgctgacgtggagaaggagtatcggtcggtcctggatgacctc
acgtcatgtacgacatccctaaggcaaatcaataaaattattgaacagcttagccctcaa
gctgccaccagcagagacatcaacaggaaactagattctgtaaaacgacagaagtataat
aaggaacaacagctaaaaaagatcactgcaaaacaaaagcatctccaggccatccttgga
ggagcagaggtgaaaattgaactagatcacgccagtctggaggaggatgcagagccgggg
ccatccagtcttggcagcatgctcatgcctgtccaggagactgcctgggaagagctcatc
cgcactggccagatgacaccttttggtacccagatccctcagaaacaggagaaaaagccc
agaaaaatcatgctcaatgaagcatcaggcttcgaaaagtatttggcagatcaagcaaaa
ctgtcttttgaaaggaagaagcaagcttgtaataaaagagcagctagaaaagctccagcc
ccagtcacgcctccagccccagtgcaaaataaaaacaaaccaaacaagaaagccagagtt
ctgtccaaaaaagaggagcgtttgaaaaagcacatcaagaaactccagaagagggctttg
cagttccaggggaaagtgggattgccaaaggcaaggagaccttgggagtcagacatgagg
ccagaggcagagggagactctgagggtgaagagtctgagtatttccccacagaggaggag
gaagaggaggaagatgaggaggtggagggggtggaggcggacctgtctggagatggtact
gactatgagctgaagcctctgcccaagggccggaaacggcagaagaaagtgccagtgcag
gagattgatgacgactttttcccaagttctggggaagaagctgaagcttcttctgtagga
gaaggaggaggaggaggtcggaaagtgggaagataccgagatgatggagatgaagattat
tataagcagcggttaaggagatggaataaactgagactgcaggacaaagagagacgtctg
aagctggaggacgattctgaggaaagtgatgctgaatttgacgaaggttttaaagtgcca
ggttttctgttcaaaaagctttttaagtaccagcagacaggtgttaggtggctgtgggaa
ttgcactgccagcaggcaggaggaattctgggagatgaaatgggattgggcaagaccatc
cagataattgccttcttggcaggtctgagctacagcaagatcaggactcgtggttcaaat
tacaggtttgaggggttgggtccaactgtaattgtctgtccaacaacagtgatgcatcag
tgggtgaaggaatttcacacgtggtggcctccgttcagagtggcaattctacatgaaacc
ggttcctatacccacaaaaaggagaaactaattcgagatgttgctcattgtcatggaatt
ttgatcacatcttactcctacattcgattgatgcaggatgacattagcaggtatgactgg
cactatgtgatcttggacgaaggacacaaaattcgaaatccaaatgctgctgtcaccctt
gcttgcaaacagtttcgcacccctcatcggatcattctgtctggctcaccgatgcaaaat
aacctccgagagctgtggtcgctctttgacttcatcttcccgggaaagttaggcacgttg
cctgtgtttatggagcagttctccgtccccatcactatggggggatattcaaatgcttcc
tcagtacaggtcaaaactgcttacaagtgtgcatgtgtcttacgagataccataaatcca
tacctactgcggagaatgaagtcagatgtcaagatgagcctttctttgccagataaaaat
gaacaggtcttattttgccgtcttacagatgagcagcataaagtctaccaaaatttcgtt
gattccaaagaagtttacaggattctcaatggagagatgcagattttctctggacttata
gccctaagaaaaatttgcaaccaccctgatctcttttctggaggtcccaagaatctcaaa
ggtcttcctgatgatgaactagaagaagatcagtttgggtactggaaacgttctgggaaa
atgattgttgttgagtctttgttgaaaatatggcacaagcagggtcagcgagtattgctg
ttttctcagtcaaggcagatgctggacatacttgaagtattccttagagcccaaaagtat
acctatctcaagatggatggtaccactacaatagcttcaagacagccactgattacaaga
tacaatgaggacacatccatatttgtgtttcttctgaccacgcgggtgggcggcttaggt
gtcaacctgacgggggcaaacagagttgtcatctatgatcccgactggaacccaagcaca
gacacgcaggcccgggagcgagcatggagaataggccagaagaagcaggtgactgtgtac
aggctcctgactgcgggcaccattgaagaaaagatctaccaccgacaaatcttcaagcag
tttttgacaaatagagtgctaaaagacccaaaacaaaggcgatttttcaaatccaatgat
ctctatgagctatttactctgactagtcctgatgcatcccagagcactgaaacaagtgca
atttttgcagtggtgtttttcctctttacaggaactggatcagatgttcagacacccaaa
tgccatctgaaaagaaggattcaaccagcatttggagcagactgtgatgttccaaaacgc
aaaaagttccctgcttctaacatatctgtaaatgatgccacatcatctgaagagaaatca
gaggctaaaggagctgaagtaaatgcagtaacttctaatcaaagtggtcctttgaaagat
gacccttacatgagtagtaatgtaactagcaatgataggcttggagaagagacaaatgca
gtatctggaccagaagagttgtcagtgattagtggaaatggggaatgttcaaattcttca
ggaacaggcaaaacttctaggccatctggtgatgaaagcattgatgaaaagttaggtctt
tcttccaaaagagaaagacccagccaggctcaaacagaatctttttcggagaataaacaa
atggaaaataatttttataagcacaagtcaaaaacaaaacatcatagtgtggcagaagaa
gagaccctggagaaatatctgagaccaaagcaaaagcctaagaactctaagcattgcaga
gacgccaagtttgaaggaactcgaattccacacctggtgaagaaaaggcgttaccagaag
caagacagtgaaaacaagagtgaggccaaggaacagagcaatgatgattatgttttggaa
aggcttttcaaaaaatcagttggcgtgcacagtgtcatgaagcacgatgccatcatggat
ggagccagcccagattatgtactggtggaggcagaagccaaccgagtggcccaggatgcc
ttgaaagcactgaagctctctcgtcagcggtgtctgggagcagcgtctggtgttcccacc
tggactggccacagggggatttctggtgcaccagcaggaaaaaagagtagatttggtaag
aaaaggaattctaacttctctgtgcagcatccttcatcaacatctccaacagagaagtgc
caggatggcatcatgaaaaaggagggaaaagataatgtccctgagcattttagtggaaga
gcagaagatgcagactcttcatccggggccctcgcttcctcctcactcttggctaaaatg
agagctagaaaccacctgattctgccagagcgtttagaaagtgaaagcgggcacctgcag
gaagcttctgccgtgctgcccaccacagaacatgatgaccttctggtggagatgagaaac
ttcatcgctttccaggcccacactgatggccaggccagcactagggagatactgcaggag
tttgaatccaagttatctgcatcacagtcttgtgtcttccgagaactattgagaaatctg
tgcactttccatagaacttctggtggtgaaggaatttggaaactcaagccagaatactgc
taa
DBGET
integrated database retrieval system
