Populus trichocarpa (black cottonwood): 18104189
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Entry
18104189 CDS
T01077
Name
(RefSeq) THO complex subunit 7A
KO
K13176
THO complex subunit 7
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18104189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
18104189
03041 Spliceosome [BR:
pop03041
]
18104189
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
18104189
Spliceosome [BR:
pop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
18104189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
APG6_N
Motif
Other DBs
NCBI-GeneID:
18104189
NCBI-ProteinID:
XP_052302471
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All DBs
Position
13:7030314..7046974
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AA seq
269 aa
AA seq
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MTEAFKPGSPYSDVTHSPVESPTGIPTEGTLKGRKISGRGETVAANYAFGPLEDDVIIKH
RLLTRTTTTRGEPPLKKLQKKFASYVSEIEKDEDNYNDCVKLSKAFLQELSTFEIPLLKS
KAVIDSNVREKENFNELKDDINRQILQAQADIEDLKKQLEESKIERQHKEECEAIRKLIA
TQPPRSLMQKVITDLEKEIAALEAENTASSRLLELRKKQFVLLLQQVDELQNTIEEDEKN
LIEEMRVATEEQKNGMEDAGGVSEAMAVD
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggcattcaaacctggatctccgtacagtgacgtgacacattcaccggtggaa
tcaccgacgggtataccgacagaaggtacgttgaaaggaagaaagatttctggaagaggg
gaaacagtagcggcgaactacgcattcggaccgctcgaagatgatgtaattataaaacat
aggctactcacccgcaccaccactacaaggggtgaacccccgctgaagaaacttcagaag
aagtttgcttcgtatgtttccgagatcgagaaggatgaggataattacaatgactgtgtc
aaactttctaaagcttttttacaggaattgtctactttcgagattccattactcaagagc
aaagctgttattgattctaatgtaagagagaaggagaattttaatgagttgaaggatgac
ataaataggcagattttgcaggcacaggctgatattgaagatttaaagaagcagcttgag
gagagcaaaattgaaaggcagcataaggaggaatgtgaggcgataaggaaattgatcgcc
acgcagcctccaaggtcacttatgcagaaggtgataacggatttggagaaagaaattgct
gctttggaggcagaaaatacagccagttctaggttactggaacttcgaaagaaacaattc
gttctcttgttgcaacaggtggatgagttacagaacactatagaggaagatgagaagaat
ttgattgaggagatgagagtggcaacagaagagcagaagaacggaatggaggatgctggt
ggggtctcggaagccatggctgttgattag
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