Populus trichocarpa (black cottonwood): 18106790
Help
Entry
18106790 CDS
T01077
Name
(RefSeq) probable aminotransferase TAT2 isoform X3
KO
K00815
tyrosine aminotransferase [EC:
2.6.1.5
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00130
Ubiquinone and other terpenoid-quinone biosynthesis
pop00270
Cysteine and methionine metabolism
pop00350
Tyrosine metabolism
pop00360
Phenylalanine metabolism
pop00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pop00950
Isoquinoline alkaloid biosynthesis
pop00960
Tropane, piperidine and pyridine alkaloid biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00034
Methionine salvage pathway
pop_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
18106790
00350 Tyrosine metabolism
18106790
00360 Phenylalanine metabolism
18106790
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
18106790
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
18106790
09110 Biosynthesis of other secondary metabolites
00950 Isoquinoline alkaloid biosynthesis
18106790
00960 Tropane, piperidine and pyridine alkaloid biosynthesis
18106790
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pop01007
]
18106790
Enzymes [BR:
pop01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.5 tyrosine transaminase
18106790
Amino acid related enzymes [BR:
pop01007
]
Aminotransferase (transaminase)
Class I
18106790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Aminotran_3
Glyco_hydro_20
Motif
Other DBs
NCBI-GeneID:
18106790
NCBI-ProteinID:
XP_006372737
LinkDB
All DBs
Position
17:974042..989329
Genome browser
AA seq
418 aa
AA seq
DB search
MENGSKKWGFQANKSLSTSSAVTVRGVLNVLQDNLNKEDTRQVMPLAHGDPSAFPCFRTT
TVADEAVVDAVRSAKYNHYAPTVGLLPARRSVADFLNRDLPYKLSPDDVFLTLGCTQAIE
ITITVLARPGANILLPRPGFPYYEARAAHSHLEARHFDLIPEKGWEVDLDAVEALADENT
VAMVVINPGNPCGSVYSYQHLQKIAETARKLGIMVIADEVYGHLTFGNAPFVPMGVFGPI
VPVLTLGSISKRWIVPGWRIGWLVTSDPNGILQESGVVESIKGCLNISSDPVTFIQGAIP
QIIDNTTEDFFTKINNILREAADICYEKIQDIPCITLPHKPEGSMFVMVKLNLSSLEDIG
DDMDFCLKLAKEESVMILPGTAVGMKNFLRITFAIEPSALEVGLERLKAFYERHAKIQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacggatcaaagaaatggggttttcaagcaaacaagagcctcagcacatcatca
gcagtcacagtccgtggagttcttaatgtcttacaggacaatctcaacaaagaagataca
agacaggtcatgccattagcccatggcgacccttctgcttttccttgttttcgtacaaca
actgtggccgacgaggctgttgttgacgctgtgagatctgccaagtacaaccattatgcc
ccaactgttggtcttcttcctgctaggaggagtgttgcagatttccttaatcgtgatctc
ccgtacaagttatcaccagatgatgtttttcttacacttggttgcacacaagcaattgaa
atcacaataactgtacttgctcgacctggtgccaacattttgcttccaagacctggattt
ccatactatgaagctcgggctgcacatagtcatctcgaagctcgccattttgatcttatc
ccagaaaagggctgggaggttgatcttgatgctgttgaagctctggcagatgagaataca
gttgccatggttgtcataaaccctggcaatccttgtggaagtgtctacagctatcaacat
ttacagaagatcgcagagacagcaagaaagcttggaattatggtgattgctgatgaagtt
tatggccatctgacatttgggaatgctccatttgtgccaatgggagtctttggaccaatt
gtgcctgtccttacactagggtccatctcaaagagatggattgttcctggctggcggatt
ggttggcttgtcacaagtgatcctaatggcatccttcaagaatctggggttgttgaatca
atcaagggatgtctcaacatttcctctgatcctgtaacattcattcagggtgcaattcct
caaatcattgacaacacgacagaggatttcttcacaaaaatcaataacatactgagagag
gccgcagacatatgctatgagaaaatccaggacatcccttgcattactttgccgcataaa
ccagagggttctatgtttgtaatggtaaaactaaacctatcttctttggaagacattggt
gatgatatggacttctgtcttaagcttgctaaagaggaatcagtcatgatactcccaggg
actgctgtgggaatgaagaatttccttcgcataacttttgccattgagccttcggcgctt
gaagttggcctcgagaggctaaaggccttttatgaaaggcatgccaagatacaataa
DBGET
integrated database retrieval system
