Populus trichocarpa (black cottonwood): 7453644
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Entry
7453644 CDS
T01077
Name
(RefSeq) synaptotagmin-1
KO
K28063
extended synaptotagmin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7453644
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
7453644
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
NT-C2
Ehbp
Motif
Other DBs
NCBI-GeneID:
7453644
NCBI-ProteinID:
XP_006384574
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Position
4:complement(18978231..18985533)
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AA seq
538 aa
AA seq
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MGFFSTILGFCGFGVGISTGLTIGYYLFIYFQPSDVKDPEVRPLVEHDSETLQRMLPEIP
LWVKNPDHDRIDWLNRFIQLMWPYLDKAICKTAENIAKPIIAEQIPKYKIDAVEFETLTL
GTLPPTFHGMKVYVTDEKELIMEPCIKWAGNPNVTVAVKAFGLKATAQVVDLQVFASPRI
TLKPLVPSFPCFANIYVSLMEKPHVDFGLKLLGADLMSIPGLYRVVQEIIKDQVANMYLW
PKTLEVPILDPAKAMKRPVGILSVKVLRAMKLKKKDLMGAADPYVKVKLTEDKLPAKKTT
VKHKNLNPEWNEEFHVVVKDPESQALELRVYDWEQVGKHDKMGMNVVPLKELTPEEPKIM
TLELLKNMDLNDPQNEKSRGQLMVELTYKPFKEDDVNLSFKEQVEQKAPEGTPAGGGLLL
VIVHEAQDVEGKHHTNPYVRLLFRGEEKRTKHVKKNRDPRWEDEFQYTLDKPPSNEKLHV
EVISTSSGIGLLHPKESLGYVDINLTDVVNNRRTNGKYHLIDSKNGQIQIELQWRPAS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggggttctttagtacaatactaggtttctgtggattcggtgttgggatttccacgggt
cttaccatcgggtactacctcttcatctacttccaaccctccgatgttaaggatcctgag
gtacggccattggtagagcatgactcggaaactttgcaacgaatgcttccagaaataccg
ctatgggtgaaaaatccggaccatgatcgcattgattggctaaacaggtttattcaatta
atgtggccttaccttgataaggccatttgtaagaccgcggagaatatagcaaaaccaata
attgccgagcagatcccaaaatacaaaattgatgcggttgagtttgaaactcttacacta
ggcaccctaccgccaacctttcatggaatgaaagtttatgtcactgatgagaaggagttg
attatggaaccatgcataaaatgggctggaaatcctaatgtcactgttgctgttaaagca
tttgggttgaaagcaactgctcaggtggttgatttgcaagtgtttgcttcaccacgcata
actttgaagcctttggtccctagctttccttgttttgccaacatctacgtgtcgctcatg
gagaagccacatgttgactttgggctcaagctcttgggggctgatttaatgtcgatacct
ggcctctatagggtcgtccaggagattattaaagatcaggttgccaatatgtatctatgg
cctaaaaccctggaagtccccatcttagatcctgcaaaagccatgaagaggcctgtagga
attctcagtgtaaaggttctgagagcaatgaagctgaagaagaaagatctgatgggagca
gcagacccctatgtgaaagtcaagctgaccgaagataagcttccagccaaaaagacgact
gtgaagcacaagaacttgaaccctgaatggaatgaggaattccatgtagttgttaaagat
ccagaatctcaggctctagaattacgtgtttatgattgggagcaggttggcaaacatgac
aagatgggtatgaatgtagtgccgctgaaagaacttaccccagaggaaccaaaaattatg
actcttgagctcctgaaaaacatggacttgaatgatcctcaaaatgaaaagtcacgtggg
caacttatggttgaattgacatataaaccattcaaagaggacgatgtaaacctaagtttt
aaagagcaggtggaacagaaggctcctgaaggaacccctgctggtggaggtctacttctt
gttattgttcacgaagctcaggatgttgaaggaaagcaccacactaatccatatgtacga
cttctttttagaggggaggagaaaaggactaagcacgtgaagaagaatagagatccaaga
tgggaggatgaattccaatatacgctggacaagcctcctagtaatgagaagctacacgtg
gaagtcatcagcacgtcgtctgggattggcctgctgcatccaaaggaatcacttggttat
gtggatatcaatctcacagatgttgttaataacagaagaaccaacggaaagtatcacctt
atagactcgaagaatggacagattcaaatagagttgcagtggagaccagcttcataa
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