Populus trichocarpa (black cottonwood): 7459749
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Entry
7459749 CDS
T01077
Name
(RefSeq) adagio protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7459749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7459749
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7459749
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS_3
PAS
F-box-like
NANM
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
7459749
NCBI-ProteinID:
XP_002314780
UniProt:
B9HVU6
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Position
10:12720701..12723622
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AA seq
627 aa
AA seq
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MSKPQEEEKEEEEEEFQSSGKRLKCTKSLKEDEMESEVSLMEDTRGGLFFHPTTPVSFVV
SDALELDFPIIYVNKVFEIFTGYHAHEVLGRNCRFLQYRDPRAQRRHPLVDPAVVSEIRR
CLEEGMEFQGELLNFRKDGTPLVNRLRLVPIHDDDGIITQVIGIQVFSEAKIDLNHVSYP
VYKETCNQRSDHSANYSPRHGQSPFTQHQEICGILQLSDEVLAHNILSRLTPRDVASIGS
VCRRIRQLTKNEQVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKVTV
GGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANPVWQRISVKSSPPGR
WGHTLSCLNGSWLVLFGGCGRQGLLNDVFVMDLDAKQPTWKEVSGGTPPLPRSWHSSCTI
EGSKLVVSGGCTDAGVLLSDTYLLDLTIDKPIWREIPATWAPPSRLGHSLSVYGRTKILM
FGGLAKSGHLRLRSGEAYTIDLEDEEPHWRQLECSALTGIGSQSSVVPPPRLDHVAVSMP
CGRNIIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKLAWGHSTCVVGGTRVLV
LGGHTGEEWILNELHELCLASKQDSEP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaccacaagaagaagaaaaggaggaagaagaagaagagtttcaaagctcagga
aaaaggctgaaatgcaccaaatcccttaaagaagatgaaatggaaagcgaggtttcatta
atggaggatacaagaggagggttgtttttccacccaacgacacccgtatcttttgtggtt
tcagatgccttagagcttgattttcctatcatttatgtcaacaaggtcttcgagatcttc
actggctaccatgctcacgaggtcctcggtcgtaactgtcggttcttacaatacagggat
ccccgtgctcaaagaaggcatcctttagtagaccctgctgttgtttctgaaatcagaaga
tgtctcgaggaagggatggaattccaaggtgaacttctaaactttaggaaggatggtact
ccactggtgaacaggctcagacttgtacctatacacgatgatgatggaattatcacacag
gtaataggtattcaggtattttctgaagccaaaatagatctgaaccatgtatcatatcca
gtctacaaagagacttgcaatcaacggtctgatcactcagctaattattctccacggcat
ggacaatcaccatttactcagcatcaagaaatatgtgggatacttcagttgtctgatgaa
gtattggctcataacattctatcacgcttgacaccaagggatgttgcatccattggatct
gtctgcagaagaatccggcaattaacaaaaaatgagcaggtaaggaagatggtttgtcaa
aatgcatggggaagagaagtcacaggtgcattggagctgatgactaaaaagttgggttgg
ggacgtctggcaagggaactgactaccctcgaagctgtctgctggaggaaagtgacagtt
ggaggtgcggttgagccttcacgttgcaatttcagtgcatgtgcagtagggaatagactt
gtattgtttggaggggaaggagtaaacatgcagccgatggatgacacttttgttctcaat
cttgatgctgcaaatccagtgtggcagcggataagtgtgaaatcatccccaccagggcgc
tggggtcacactctttcttgcctaaatggttcctggttggtgttgtttggaggatgtgga
aggcaagggttgctcaatgatgtctttgttatggacttggatgccaaacagccgacatgg
aaggaagtttctggtggaactccccctcttcctagatcgtggcatagctcttgcaccata
gaaggttctaagttggttgtctcaggtggatgtacagatgctggggtacttctcagtgac
acctacttgttggatctcactatagacaagcctatatggagggagatcccagctacttgg
gctcctccatctcgattagggcattcactctcagtttatggtcgtacgaaaattcttatg
tttggtggacttgccaagagtgggcacttacgactgagatcaggtgaggcctacaccatt
gacttggaggacgaagaaccacattggaggcaattggagtgtagtgcattaactggtata
gggagccagagttctgttgtcccccctcccagacttgatcatgttgctgttagcatgccc
tgtggaaggaatataatctttggtggttctattgctgggttgcactctccttcccagctt
ttcctgttagatcctgctgaggagaaaccatcatggaggattctcaacgttcctggtcaa
ccacctaagcttgcgtggggccatagcacctgtgtggttggagggacgagggtcctggta
ttgggagggcacactggggaggaatggatactaaacgaattgcatgagttgtgcttagca
agcaagcaagactcagaaccatga
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