KEGG   Populus trichocarpa (black cottonwood): 7459749
Entry
7459749           CDS       T01077                                 
Name
(RefSeq) adagio protein 3 isoform X1
  KO
K12116  flavin-binding kelch repeat F-box protein 1
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pop00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    7459749
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7459749
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     7459749
SSDB
Motif
Pfam: Kelch_KLHDC2_KLHL20_DRC7 Kelch_4 Kelch_3 Kelch_2 Beta-prop_ATRN-LZTR1 Kelch_5 PAS_9 Kelch_1 Kelch_6 PAS_3 PAS F-box-like NANM F-box PAS_4 PAS_8
Other DBs
NCBI-GeneID: 7459749
NCBI-ProteinID: XP_002314780
UniProt: B9HVU6
LinkDB
Position
10:12720701..12723622
AA seq 627 aa
MSKPQEEEKEEEEEEFQSSGKRLKCTKSLKEDEMESEVSLMEDTRGGLFFHPTTPVSFVV
SDALELDFPIIYVNKVFEIFTGYHAHEVLGRNCRFLQYRDPRAQRRHPLVDPAVVSEIRR
CLEEGMEFQGELLNFRKDGTPLVNRLRLVPIHDDDGIITQVIGIQVFSEAKIDLNHVSYP
VYKETCNQRSDHSANYSPRHGQSPFTQHQEICGILQLSDEVLAHNILSRLTPRDVASIGS
VCRRIRQLTKNEQVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTLEAVCWRKVTV
GGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANPVWQRISVKSSPPGR
WGHTLSCLNGSWLVLFGGCGRQGLLNDVFVMDLDAKQPTWKEVSGGTPPLPRSWHSSCTI
EGSKLVVSGGCTDAGVLLSDTYLLDLTIDKPIWREIPATWAPPSRLGHSLSVYGRTKILM
FGGLAKSGHLRLRSGEAYTIDLEDEEPHWRQLECSALTGIGSQSSVVPPPRLDHVAVSMP
CGRNIIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKLAWGHSTCVVGGTRVLV
LGGHTGEEWILNELHELCLASKQDSEP
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgtcaaaaccacaagaagaagaaaaggaggaagaagaagaagagtttcaaagctcagga
aaaaggctgaaatgcaccaaatcccttaaagaagatgaaatggaaagcgaggtttcatta
atggaggatacaagaggagggttgtttttccacccaacgacacccgtatcttttgtggtt
tcagatgccttagagcttgattttcctatcatttatgtcaacaaggtcttcgagatcttc
actggctaccatgctcacgaggtcctcggtcgtaactgtcggttcttacaatacagggat
ccccgtgctcaaagaaggcatcctttagtagaccctgctgttgtttctgaaatcagaaga
tgtctcgaggaagggatggaattccaaggtgaacttctaaactttaggaaggatggtact
ccactggtgaacaggctcagacttgtacctatacacgatgatgatggaattatcacacag
gtaataggtattcaggtattttctgaagccaaaatagatctgaaccatgtatcatatcca
gtctacaaagagacttgcaatcaacggtctgatcactcagctaattattctccacggcat
ggacaatcaccatttactcagcatcaagaaatatgtgggatacttcagttgtctgatgaa
gtattggctcataacattctatcacgcttgacaccaagggatgttgcatccattggatct
gtctgcagaagaatccggcaattaacaaaaaatgagcaggtaaggaagatggtttgtcaa
aatgcatggggaagagaagtcacaggtgcattggagctgatgactaaaaagttgggttgg
ggacgtctggcaagggaactgactaccctcgaagctgtctgctggaggaaagtgacagtt
ggaggtgcggttgagccttcacgttgcaatttcagtgcatgtgcagtagggaatagactt
gtattgtttggaggggaaggagtaaacatgcagccgatggatgacacttttgttctcaat
cttgatgctgcaaatccagtgtggcagcggataagtgtgaaatcatccccaccagggcgc
tggggtcacactctttcttgcctaaatggttcctggttggtgttgtttggaggatgtgga
aggcaagggttgctcaatgatgtctttgttatggacttggatgccaaacagccgacatgg
aaggaagtttctggtggaactccccctcttcctagatcgtggcatagctcttgcaccata
gaaggttctaagttggttgtctcaggtggatgtacagatgctggggtacttctcagtgac
acctacttgttggatctcactatagacaagcctatatggagggagatcccagctacttgg
gctcctccatctcgattagggcattcactctcagtttatggtcgtacgaaaattcttatg
tttggtggacttgccaagagtgggcacttacgactgagatcaggtgaggcctacaccatt
gacttggaggacgaagaaccacattggaggcaattggagtgtagtgcattaactggtata
gggagccagagttctgttgtcccccctcccagacttgatcatgttgctgttagcatgccc
tgtggaaggaatataatctttggtggttctattgctgggttgcactctccttcccagctt
ttcctgttagatcctgctgaggagaaaccatcatggaggattctcaacgttcctggtcaa
ccacctaagcttgcgtggggccatagcacctgtgtggttggagggacgagggtcctggta
ttgggagggcacactggggaggaatggatactaaacgaattgcatgagttgtgcttagca
agcaagcaagactcagaaccatga

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