Populus trichocarpa (black cottonwood): 7466289
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Entry
7466289 CDS
T01077
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
7466289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7466289
03012 Translation factors [BR:
pop03012
]
7466289
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
7466289
Translation factors [BR:
pop03012
]
Eukaryotic type
Release factors
7466289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
She2p
M157_N_1
Motif
Other DBs
NCBI-GeneID:
7466289
NCBI-ProteinID:
XP_002321067
UniProt:
B9IA37
LinkDB
All DBs
Position
14:complement(9569955..9574341)
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AA seq
436 aa
AA seq
DB search
MADGHESDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDINRYTLKNSATGEIIIKHLNKDQEADQNNFRD
SATAAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDGEVYEDSD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgatggtcatgagtcggacaagaatattgagatatggaaaatcaaaaagttgatt
aaggcattggagtctgcaaggggtaatggcacgagcatgatatctcttataatgcctcct
cgtgatcaaatatctcgggtcacaaagatgttaggtgatgaatttggaactgcttcaaac
attaaaagtagggtcaaccgccagtctgtcttgggtgccatcacatctgctcagcagagg
ctgaagctttataacaaggttccgccgaatgggctggtgctttatacgggaacaattgtt
actgaagatggaaaagagaagaaggtgacaattgattttgaacctttcaaacctataaac
gcatcattgtacctctgtgacaacaagtttcacacagaagcactcaatgagctcttagag
tctgatgacaagtttggttttattgtcatggatgggaacggcaccttatttgggacactg
agtggaaacacacgagaagtgctccataaatttactgttgatttgccaaagaagcacgga
agaggagggcagtctgctctgcggtttgctcgacttcggatggaaaaacggcacaactat
gtgaggaaaactgcagagcttgccacccagttcttcattaatcctgctaccagtcagccc
aatgttgctgggttgatactagctggttcagctgacttcaagactgagctcagccagtca
gatatgtttgacccaaggttgcaagccaagatattgaacgtggttgatgtttcatatggt
ggagaaaatggtttcaaccaagctattgagctgtcagctgagattctatcaaatgtgaag
tttatacaggaaaaacgtttgatagggaaatactttgaggagatcagccaggatactggg
aagtatgtctttggtgttgatgatacattgaaggctctggaaatgggtgctgtcgaaatc
cttatcgtgtgggaaaatctagatatcaataggtacacgctgaaaaacagtgctacagga
gaaattatcataaagcacttgaacaaggaccaagaggctgatcagaataactttcgggat
tcagccactgctgcagagttggaggttcaggagaagatgcccttgcttgagtggtttgcc
aatgagtacaagcgatttggttgtacacttgaattcgtcaccaataaatcacaagaggga
tcgcagttttgcagggggtttggtggaattggcggtattcttcgctaccagcttgacatg
cgatcatttgatgagttgtccgatggagaagtttatgaggattccgattag
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