Populus trichocarpa (black cottonwood): 7468459
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Entry
7468459 CDS
T01077
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7468459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7468459
Membrane trafficking [BR:
pop04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
7468459
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Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
7468459
NCBI-ProteinID:
XP_002316416
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Position
10:complement(21406115..21409677)
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AA seq
385 aa
AA seq
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MQGTVTCGSWIRRPENLNLVVLGKSSKKRESASRSVLEIFSFDPQTASLSNSPQVTYVFE
ETEGEPVTIAVHPNGDDFVCSTSKGGCKLLELSGQETNLKLLAKELPPLQDVGPQNCMAF
SVDGSKFATGGVDGRVRILKWPSLRIILDEAKAHNSVRDMDFSLDSEFLASTSTDGSARI
WKAEDGSAVATLTRNSDEKIELCRFSKDGTKPFLFCAVQKGDKAVTSVYDISTWKKIGYK
RLLRKPAAIMSISLDGKYLALGSKDGDVCVAEVKTMEVSHLSRRLHLGTCITSLEFCPSQ
RVVLTTSNEWGAVVTKLNVPADWKEWQIYLVLVGLFLASAVAFYIFFQNSDSFWKFPLGR
DQPGRPKFEILDPQYSEDAFGPLDM
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaactgtaacatgcgggtcatggatccggagacctgagaacttgaatcttgtt
gtgcttggcaagtcatcgaagaagagagagtctgcttctcggtctgtgcttgagatcttc
tcttttgatccccaaacagcttctctctcaaactctcctcaggtaacttatgtgtttgaa
gagacagaaggtgaaccagtgacaattgcagtgcatccaaatggagatgattttgtgtgt
tctacaagtaaaggtggatgcaaattacttgagttgtctggtcaagaaacaaatttaaag
ttgttagccaaagaactacctcctctccaagatgttggtccacagaattgcatggctttt
agtgttgatgggtctaaatttgccactggtggggtggatgggcgtgtaagaattttgaag
tggccgagtttgcgcatcattttggacgaagcaaaagcacacaattctgtcagggatatg
gattttagcctggattcagagttcctagcttcaacatctactgatgggtcagcaagaata
tggaaagcagaagatggttcagctgtggctactttgactcgcaactcagatgaaaagatt
gaattgtgccgattctccaaggatgggacgaaaccatttttattttgtgctgtgcagaaa
ggtgacaaagctgtcacttcagtttatgatataagtacatggaaaaagattgggtataag
aggctacttagaaagcctgctgccattatgtctatcagcctggacgggaaatatcttgct
ctaggaagcaaagatggagatgtctgtgtagcagaagtaaagacaatggaggtttcccac
ttgagtaggaggctgcacctgggtacatgcattacatctctggagttctgtcccagtcaa
agggttgtgcttactacttccaatgaatggggagcagtggtaactaagttgaatgttcct
gcagattggaaagagtggcagatttatttggttctcgtaggactgttcctggcgtctgct
gttgcattttacattttctttcaaaactctgattcattttggaaatttccacttggaaga
gatcagcctggaaggccgaagtttgaaattttggatccacagtactctgaagatgcattt
gggcctctagatatgtga
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