Populus trichocarpa (black cottonwood): 7469091
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Entry
7469091 CDS
T01077
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00730
Thiamine metabolism
pop00900
Terpenoid backbone biosynthesis
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Module
pop_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
7469091
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
7469091
Enzymes [BR:
pop01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
7469091
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
TPP_enzyme_C
Transketolase_N
Motif
Other DBs
NCBI-GeneID:
7469091
NCBI-ProteinID:
XP_024463484
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All DBs
Position
8:complement(13878523..13883059)
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AA seq
721 aa
AA seq
DB search
MALSAFSLPAHVNSVTSLDHLQNYSFLSSHFLWRTDLLCQSFKKINQVHVKKRPNGVCAS
LSESGEFPSQRPPTPLLDTVNYPIHMKNLSIKELKQLAEELRSDVIFNVSKTGGHLGSSL
GVVELTVALHYVFNSPQDKILWDVGHQAYPHKILTGRRDKMHTIRQTNGLAGFTKRSESE
YDCFGTGHSSTTISAGLGMAVGRDLKGRANNVVAVIGDGAMTAGQAYEAMNNAGYLDSDM
IVILNDNKQVSLPTANLDGPIPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMHE
LAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEVKSTKTTGPVLIHV
VTEKGRGYPYAERAADKYHGVNKFDPATGKQSKASASTQSYTTYFAEALIAEAEADKDVV
AIHAAMGGGTGLNLFLRRFPTRCFDVGIAEQHAVTFAAGLACEGLKPFCAIYSSFLQRAY
DQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDVTYMACLPNMVVMAPSDEAELFHM
VATAAAIDDRPSCFRYPRGNGVGVQLPPENKGIPLEVGKGRILIEGERVALLGYGTAVQS
CLAAASLVERHGIHLTVADARFCKPLDNALIRSLAKSHEVLITVEEGSIGGFGSHVAHFL
ALDGLLDGKLKWRPVVLPDRYIDHGSPADQLVEAGLTPSHIAATVFNILGQRRNSLEIMS
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggctctctctgcattttctttgcctgctcatgtcaatagtgtcacaagtttagaccac
cttcaaaattatagttttttatcttctcatttcttatggagaacagatctgctgtgccaa
tcttttaaaaagatcaatcaggtacatgtcaagaaaaggccaaatggggtttgtgcatca
ctatcagagagcggagagtttccttcacagaggccaccaacacctctcttggacaccgta
aactatccaattcatatgaaaaatctatctatcaaggagctaaaacaactagcagaggag
ctgcggtccgacgttatcttcaatgtttcgaaaactgggggtcacttaggctctagcctc
ggtgttgtggagctcaccgtggctcttcactatgttttcaatagccctcaagacaagata
ctgtgggatgttggccatcaggcttaccctcacaagattctaactgggagaagagacaag
atgcatacaataagacagaccaatggattggctggttttacaaagcgatcggagagtgaa
tatgattgttttggcacaggtcacagctctaccaccatttctgctggcttgggaatggct
gtggggagagatctaaaaggaagagcgaacaatgtggttgctgttataggtgatggtgcc
atgacagcaggacaagcttatgaagctatgaacaatgcagggtacctagactctgatatg
atcgttattcttaatgacaacaaacaggtttctttaccaactgccaatttagatgggcca
ataccacctgtcggagccttgagcagtgctctcagtaggctgcaatcaaacaggcctctc
agagaactaagagaggttgctaagggagttacaaaacaaattggtggaccgatgcatgaa
ttggcagcaaaggttgacgaatatgctcgtggaatgatcagtggttctggatcaaccctc
tttgaagagcttggtctctattatattggtccggtggacgggcacaatattgatgatctt
attgccattctcaaagaggtgaagagtaccaaaacaacaggtcctgtcctaatccatgtt
gtcaccgagaaaggtcgggggtatccatatgctgagagagctgcggacaagtaccacgga
gtgaacaagtttgatcccgcaactggaaagcagtccaaggcaagtgctagcacacagtct
tacacaacatattttgcagaggctttgattgcagaagctgaggcggataaagatgttgtt
gcaattcatgctgcaatgggaggagggacaggcttaaatctcttccttcgccgttttccg
acaagatgttttgatgtggggatcgcagaacagcatgctgttacttttgctgcgggactt
gcctgtgaaggtcttaaacctttttgcgcaatctactcgtctttcttgcagagggcttat
gaccaggtggtacatgatgttgatttgcagaaacttccagtaagattcgcaatggacaga
gctgggttggtgggagcagatggtcccacacattgtggagcttttgatgtcacttatatg
gcatgcctccctaacatggttgttatggctccttctgatgaggcagagcttttccacatg
gttgctactgctgctgctatagatgatcgtcctagctgtttccgctacccgagaggtaat
ggtgttggtgttcagttgccaccagaaaacaagggcattcctcttgaggttggaaaaggc
aggatattgattgaaggggagagggtggcactcttaggctatggtaccgcagtccagagc
tgtttagctgctgcctctttagtggaacgccacggtattcatctgacagttgcagatgcc
aggttctgcaagccattggacaatgcccttattcgtagccttgcaaaatcacacgaggtt
ttgattacagtggaagaaggatcaatcgggggcttcgggtctcatgttgctcattttctg
gccctggatggtcttcttgatggcaaactaaagtggcgaccggttgttcttcctgatagg
tacattgaccatggatcgccagctgatcagctggtagaagctggtctcacaccatctcac
attgcagcaacagtattcaatatactcggacaaagaagaaactctctggagattatgtca
tcataa
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