Populus trichocarpa (black cottonwood): 7471583
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Entry
7471583 CDS
T01077
Name
(RefSeq) transcription factor HY5
KO
K16241
transcription factor HY5
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7471583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pop03000
]
7471583
Transcription factors [BR:
pop03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
7471583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
ATF7IP_BD
Gal4_dimer
GAS
FlaC_arch
GIT_CC
SHE3
DMPK_coil
Uso1_p115_C
Phlebovirus_NSM
Phage_scaffold
FmiP_Thoc5
TMCO5
SYNE3
CENP-Q
APG6_N
TSC22
Nnf1
GrpE
CENPH
STX6_10_61_N
CASP_C
Macoilin
V_ATPase_I
Herpes_BLRF2
Motif
Other DBs
NCBI-GeneID:
7471583
NCBI-ProteinID:
XP_002308656
UniProt:
B9HA32
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All DBs
Position
6:25047963..25050699
Genome browser
AA seq
169 aa
AA seq
DB search
MQEQAASSIPAYSFPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
GSIAGPGRVQPAGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
VKDLEKKNSELEEKLSTLQNENQMLRHILKNTTASRRGGSNSANADGSS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaacaagcagccagttcaattcctgcttattcttttccgtctagcagtgagaga
tcttcaagttctgctcctcaacttgaagtcaaagaaggtatggagagtgatgaggaaata
agaagagtgccagagatgagcggtgaaccggccgggacatcagcctctggcagagagacc
ggttcaattgccggtccgggcagagtgcagcctgcaggagagggacaaagtcagagaaag
agaggaaggagtccagctgacaaagaaaacaagaggctaaagaggttgttgaggaataga
gtatcagcccagcaagcaagggagaggaagaaggcttacttgactgagttggaaacacga
gttaaagacttggaaaagaagaattctgagcttgaagagaagctttctaccttgcagaat
gagaatcaaatgcttagacatatactgaagaacacaacagcaagcaggagaggaggcagc
aatagtgctaatgcagatggctcttcatga
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integrated database retrieval system