KEGG   Populus trichocarpa (black cottonwood): 7471583
Entry
7471583           CDS       T01077                                 
Name
(RefSeq) transcription factor HY5
  KO
K16241  transcription factor HY5
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:pop00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    7471583
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pop03000]
    7471583
Transcription factors [BR:pop03000]
 Eukaryotic type
  Basic leucine zipper (bZIP)
   Plant bZIP factors
    7471583
SSDB
Motif
Pfam: bZIP_1 bZIP_2 bZIP_Maf ATF7IP_BD Gal4_dimer GAS FlaC_arch GIT_CC SHE3 DMPK_coil Uso1_p115_C Phlebovirus_NSM Phage_scaffold FmiP_Thoc5 TMCO5 SYNE3 CENP-Q APG6_N TSC22 Nnf1 GrpE CENPH STX6_10_61_N CASP_C Macoilin V_ATPase_I Herpes_BLRF2
Other DBs
NCBI-GeneID: 7471583
NCBI-ProteinID: XP_002308656
UniProt: B9HA32
LinkDB
Position
6:25047963..25050699
AA seq 169 aa
MQEQAASSIPAYSFPSSSERSSSSAPQLEVKEGMESDEEIRRVPEMSGEPAGTSASGRET
GSIAGPGRVQPAGEGQSQRKRGRSPADKENKRLKRLLRNRVSAQQARERKKAYLTELETR
VKDLEKKNSELEEKLSTLQNENQMLRHILKNTTASRRGGSNSANADGSS
NT seq 510 nt   +upstreamnt  +downstreamnt
atgcaagaacaagcagccagttcaattcctgcttattcttttccgtctagcagtgagaga
tcttcaagttctgctcctcaacttgaagtcaaagaaggtatggagagtgatgaggaaata
agaagagtgccagagatgagcggtgaaccggccgggacatcagcctctggcagagagacc
ggttcaattgccggtccgggcagagtgcagcctgcaggagagggacaaagtcagagaaag
agaggaaggagtccagctgacaaagaaaacaagaggctaaagaggttgttgaggaataga
gtatcagcccagcaagcaagggagaggaagaaggcttacttgactgagttggaaacacga
gttaaagacttggaaaagaagaattctgagcttgaagagaagctttctaccttgcagaat
gagaatcaaatgcttagacatatactgaagaacacaacagcaagcaggagaggaggcagc
aatagtgctaatgcagatggctcttcatga

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