Populus trichocarpa (black cottonwood): 7475094
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Entry
7475094 CDS
T01077
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
7475094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pop03019
]
7475094
Messenger RNA biogenesis [BR:
pop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
7475094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
7475094
NCBI-ProteinID:
XP_002299732
UniProt:
B9GGL5
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All DBs
Position
1:complement(16850436..16854875)
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AA seq
329 aa
AA seq
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MSLVNKSSGRQSLFFQDLASPVSAGKGKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLE
DRSEISPESGIPDYPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFALISGQNTQQ
GSPISTWWSPSKARSSEHEDKGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGNL
DEEEWVTVYGFAPGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNG
MQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPDSNALRASPRPHYLQNG
STSARQSGGVIASPAKSMVSKIFDVMFGI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtttagtgaataaatcctctgggaggcaatccttgtttttccaagatttggcatca
cctgtttctgctggtaaagggaagttctcgactccagctcaggctgctgctgtatctgct
ctatggcgtgacaattttgggggttccgatcttcctccccctcccttttacaccttggag
gaccgttcggaaatctctcccgagtctgggattcctgattaccctttatctcctgacatc
aaatctcaccctacaacatctccatttcagtcttctgggagggagtttggtactccccca
aaaaccaaatccgaggctactacttcctttgctttgatcagtgggcagaacactcaacag
ggttctccgatttcgacttggtggtcaccatcaaaagctagaagcagcgaacacgaagac
aaaggtaaaggttctccagttgagggtgtcgtccaacctggtgctttaatcacacttcca
ccgcctcgagaagttgcaagaccggagaagcataggaactgcgtgcctgcgggtaacctt
gacgaggaagaatgggttactgtttatggatttgctccgggtgataccaatttagtgtta
cgggagtttgaaaaatgcggtgtgatcttgaaacatgttcctggtccaagggaagctaac
tggatgcacattctctatcagagtcgagctgatgctcagaaggctcttagcaagaatggg
atgcaaatcaacggagtactaatcattggtgtgaagctagtggatccaatgcaacgccag
gctttgaacgaaagaattaacaatcagggattcatgaccttacccccaccatcatcgact
agaaccccagattcaaacgcattaagagcctctcctcgcccccactatcttcaaaatggc
agcaccagtgcccggcagtcaggaggtgtgattgcttccccagcgaagtccatggtatcc
aaaatctttgatgttatgtttggcatttag
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