KEGG   Populus trichocarpa (black cottonwood): 7478099
Entry
7478099           CDS       T01077                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 9
  KO
K03133  transcription initiation factor TFIID subunit 9B
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    7478099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pop03021]
    7478099
   03036 Chromosome and associated proteins [BR:pop03036]
    7478099
Transcription machinery [BR:pop03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     7478099
   Coactivators
    SAGA/TFTC/STAGA complex
     7478099
Chromosome and associated proteins [BR:pop03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     7478099
    STAGA complex
     7478099
    TFTC complex
     7478099
    SAGA complex
     7478099
    SLIK complex
     7478099
SSDB
Motif
Pfam: TFIID-31kDa CENP-S Bromo_TP LonB_AAA-LID CENP-T_C Histone TIP49_C
Other DBs
NCBI-GeneID: 7478099
NCBI-ProteinID: XP_002299587
UniProt: A9PCE8 B9GKT8
LinkDB
Position
1:complement(14386018..14388171)
AA seq 175 aa
MAEGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKT
AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLIS
PNYQLAIPKKRTAQAIEETEEDEESADPNQSQEQKTDPPQLTPQRVSFPLTKRPK
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggagggagaagaagacatgccaagggatgccaagattgtgaaatcattgcttaaa
tcaatgggtgtcgaggattatgaacctcgtgttgtgcatcagtttttggagttgtggtat
cgttatgttgttgatgtgttgacagatgcacaggtttattcagagcatgctaacaaaact
gcaattgactgtgatgatgtcaagcttgctattcaatctaaagtcaatttcagcttctcg
caacccccacctagagaggttttactagagttggccagaaataggaacaaaatcccattg
cctaagtcaatagctgggcctggtatccctcttccacccgagcaggacacgttgatcagt
ccaaactatcaacttgctatcccaaagaagcggacggcccaggcaatagaagagacagag
gaggatgaagagagtgctgatcccaaccaatcacaagaacagaagacggatcctccacag
cttactcctcaaagagtatcctttcctctcaccaaacgtcccaagtga

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