Populus trichocarpa (black cottonwood): 7478099
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Entry
7478099 CDS
T01077
Name
(RefSeq) transcription initiation factor TFIID subunit 9
KO
K03133
transcription initiation factor TFIID subunit 9B
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
7478099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pop03021
]
7478099
03036 Chromosome and associated proteins [BR:
pop03036
]
7478099
Transcription machinery [BR:
pop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
7478099
Coactivators
SAGA/TFTC/STAGA complex
7478099
Chromosome and associated proteins [BR:
pop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
7478099
STAGA complex
7478099
TFTC complex
7478099
SAGA complex
7478099
SLIK complex
7478099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID-31kDa
CENP-S
Bromo_TP
LonB_AAA-LID
CENP-T_C
Histone
TIP49_C
Motif
Other DBs
NCBI-GeneID:
7478099
NCBI-ProteinID:
XP_002299587
UniProt:
A9PCE8
B9GKT8
LinkDB
All DBs
Position
1:complement(14386018..14388171)
Genome browser
AA seq
175 aa
AA seq
DB search
MAEGEEDMPRDAKIVKSLLKSMGVEDYEPRVVHQFLELWYRYVVDVLTDAQVYSEHANKT
AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPKSIAGPGIPLPPEQDTLIS
PNYQLAIPKKRTAQAIEETEEDEESADPNQSQEQKTDPPQLTPQRVSFPLTKRPK
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggagaagaagacatgccaagggatgccaagattgtgaaatcattgcttaaa
tcaatgggtgtcgaggattatgaacctcgtgttgtgcatcagtttttggagttgtggtat
cgttatgttgttgatgtgttgacagatgcacaggtttattcagagcatgctaacaaaact
gcaattgactgtgatgatgtcaagcttgctattcaatctaaagtcaatttcagcttctcg
caacccccacctagagaggttttactagagttggccagaaataggaacaaaatcccattg
cctaagtcaatagctgggcctggtatccctcttccacccgagcaggacacgttgatcagt
ccaaactatcaacttgctatcccaaagaagcggacggcccaggcaatagaagagacagag
gaggatgaagagagtgctgatcccaaccaatcacaagaacagaagacggatcctccacag
cttactcctcaaagagtatcctttcctctcaccaaacgtcccaagtga
DBGET
integrated database retrieval system