Populus trichocarpa (black cottonwood): 7478146
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Entry
7478146 CDS
T01077
Name
(RefSeq) SUPPRESSOR OF ABI3-5
KO
K13099
CD2 antigen cytoplasmic tail-binding protein 2
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pop01009
]
7478146
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pop03041
]
7478146
Protein phosphatases and associated proteins [BR:
pop01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
7478146
Spliceosome [BR:
pop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
7478146
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Gene cluster
GFIT
Motif
Pfam:
OCRE
Motif
Other DBs
NCBI-GeneID:
7478146
NCBI-ProteinID:
XP_024452290
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Position
3:2471636..2477647
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AA seq
403 aa
AA seq
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MEGKRKRPFLEDIEDDDKSNKQKKVRFPKGKKVKSVDERVDRGKAEEEGPSDLKDPRLAA
KERAMLRSLITDEGFSGDINDASAAEVAYEENENFVEDGIQIEPFNLEKEREEGYFDADG
NFVEYINENEIKDAWLDSVQVHERYVGKTSVASINEDDEKDDGRDLSSEEIGMMKSRIAN
LLEPGETVLQALRRLKGRSNKSKEKMSTETQLLFDQLTEDANKLLDHGEYNVYHDKQEVF
KREAEGYERLAIARGKVAAISEGLEDSGNGMEKGLSSGVTGLGAASSAPSDGDVGPSIPS
VSTAEISGCDGDAFDMFGDDEDNATAIASQPSSDGLNAISGAGSLQSDYVYDETSGYYYS
SSLGYYYDPSTGLFCQATSGQWYSYNKETGTYSEIQEVASNAN
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaagcgaaagcgcccgttccttgaagacattgaagacgatgacaaatccaac
aagcagaagaaggttagatttcctaaagggaagaaggtgaagagtgtggatgaaagagtt
gacaggggcaaagctgaagaagaaggtccaagtgacttgaaggatcctcgtctcgcagcc
aaggagcgtgcgatgcttcgcagtctgatcaccgatgaaggttttagtggagatattaat
gatgcctctgctgctgaagtcgcttatgaggaaaatgagaatttcgtggaagatgggatt
cagatagaaccgtttaatctcgagaaagagagagaagaaggttattttgatgctgacgga
aatttcgtggaatatataaatgaaaatgaaatcaaggatgcgtggctggatagtgttcaa
gttcatgaaagatatgttggaaaaacctctgtggcaagtattaatgaagatgatgagaaa
gatgatggccgtgacctatcttctgaagaaattggaatgatgaagagccggattgccaac
ttgcttgagccgggagaaacggttttgcaagctttgagaaggttgaaaggaagatcaaat
aagagcaaggagaagatgtccactgagacacaacttctgtttgaccagctaactgaagat
gccaacaagctgttggatcatggcgagtacaatgtatatcacgacaagcaagaggttttc
aagcgtgaggcagaaggatatgaaagattagctatagctagggggaaggtggcagccatc
agtgaaggcctagaggattctggtaatggcatggagaagggcttgtcctctggtgtgact
ggtcttggcgcggcctcgtcagctccctctgatggggacgtgggtccttcaatcccaagt
gtatctactgcggagatctcaggctgtgatggtgatgcatttgacatgtttggggatgat
gaggataatgccactgctattgcaagtcaaccatcatcagatggtcttaatgccatttct
ggagctggatctttgcaaagtgattatgtctatgacgagacttcaggttactactacagc
agcagtttgggatattattatgacccatctacaggactgttctgccaggcaacatcaggg
caatggtactcctataacaaggaaactggcacgtacagcgaaattcaggaggttgcatcc
aatgcaaactaa
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