KEGG   Populus trichocarpa (black cottonwood): 7480662
Entry
7480662           CDS       T01077                                 
Name
(RefSeq) protein ELC
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
pop03250  Viral life cycle - HIV-1
pop04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pop00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    7480662
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    7480662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pop04131]
    7480662
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pop04147]
    7480662
Membrane trafficking [BR:pop04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    7480662
Exosome [BR:pop04147]
 Exosomal proteins
  Proteins found in most exosomes
   7480662
SSDB
Motif
Pfam: UEV Vps23_core Lpp-LpqN UQ_con
Other DBs
NCBI-GeneID: 7480662
NCBI-ProteinID: XP_024450760
LinkDB
Position
2:complement(2999898..3001195)
AA seq 336 aa
MPPSPSIEFIDTALSCTSRFALSYTDSKQKWFIRKHLLSLIQDYPTFTLSTNTFFHDDGT
TVNLLYATGHLHVANHTPSIPLTIWIHENYPCMPPMVYVLSDSTSPIHQDHPFVHSSGAT
SSPYLQTWVFPRCHLTELVHNLVRIFSHDHPFVYSPAASFTHPSLVSKMEALDRLSGMLH
YDRIVLLAQTEEEMEDLSNLQSEMVKRDDIITSMIMGLEHERMNLKHRVMNLMNQADVLV
NWLRVNDAKSLVTKLEGEMDDDDAFEAGDEDSKLLIEFLAADSAIEDSMYALDKAVEHGV
VSFDAYLRQVRMLAREQFFLRSKLVKLRGPSILHWP
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgccaccctcaccctcgatcgaattcattgacaccgcactttcttgcacgagccgcttc
gcattatcctatacagactctaaacaaaaatggttcatcagaaaacacctcctttcttta
atccaagattaccccactttcaccctctcaaccaatactttctttcacgatgatggcacc
actgtgaaccttctgtatgccactggccatctccatgtcgccaatcatactccttctata
cctctcacaatctggatccatgaaaactatccttgcatgcctcctatggtctatgtttta
tcagattctacgtctccaattcatcaagaccacccctttgttcactcttctggtgcgacc
tcttctccttacctgcaaacctgggtattccccagatgccacctcactgaactcgtgcac
aaccttgtcaggattttctctcatgaccatcctttcgtttactcgccggcagctagtttt
acccatccctctcttgtctctaagatggaggctctcgatcggctttcaggtatgcttcac
tacgacagaattgtcttgctggcccaaactgaagaggaaatggaggatttatctaatttg
caatccgaaatggtgaaaagagatgatatcatcacaagtatgattatgggacttgaacat
gaaagaatgaacttgaaacatagagtcatgaatttgatgaaccaagctgatgtcctagtg
aactggttgcgagttaatgatgcaaaatcactcgtgacaaagttagagggtgaaatggat
gatgatgatgcatttgaagctggcgatgaagattcaaaattgttgatagaattcttggcc
gcggatagtgccatagaggattcaatgtatgcgttggacaaggcagtcgagcacggagtg
gtaagttttgatgcatacttaaggcaggtaagaatgctggcaagagagcagttctttttg
agatctaagcttgtaaaattgagaggtcctagcatactccattggccttga

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