Populus trichocarpa (black cottonwood): 7480662
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Entry
7480662 CDS
T01077
Name
(RefSeq) protein ELC
KO
K12183
ESCRT-I complex subunit TSG101
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03250
Viral life cycle - HIV-1
pop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
7480662
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
7480662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7480662
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7480662
Membrane trafficking [BR:
pop04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
7480662
Exosome [BR:
pop04147
]
Exosomal proteins
Proteins found in most exosomes
7480662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
Lpp-LpqN
UQ_con
Motif
Other DBs
NCBI-GeneID:
7480662
NCBI-ProteinID:
XP_024450760
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Position
2:complement(2999898..3001195)
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AA seq
336 aa
AA seq
DB search
MPPSPSIEFIDTALSCTSRFALSYTDSKQKWFIRKHLLSLIQDYPTFTLSTNTFFHDDGT
TVNLLYATGHLHVANHTPSIPLTIWIHENYPCMPPMVYVLSDSTSPIHQDHPFVHSSGAT
SSPYLQTWVFPRCHLTELVHNLVRIFSHDHPFVYSPAASFTHPSLVSKMEALDRLSGMLH
YDRIVLLAQTEEEMEDLSNLQSEMVKRDDIITSMIMGLEHERMNLKHRVMNLMNQADVLV
NWLRVNDAKSLVTKLEGEMDDDDAFEAGDEDSKLLIEFLAADSAIEDSMYALDKAVEHGV
VSFDAYLRQVRMLAREQFFLRSKLVKLRGPSILHWP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgccaccctcaccctcgatcgaattcattgacaccgcactttcttgcacgagccgcttc
gcattatcctatacagactctaaacaaaaatggttcatcagaaaacacctcctttcttta
atccaagattaccccactttcaccctctcaaccaatactttctttcacgatgatggcacc
actgtgaaccttctgtatgccactggccatctccatgtcgccaatcatactccttctata
cctctcacaatctggatccatgaaaactatccttgcatgcctcctatggtctatgtttta
tcagattctacgtctccaattcatcaagaccacccctttgttcactcttctggtgcgacc
tcttctccttacctgcaaacctgggtattccccagatgccacctcactgaactcgtgcac
aaccttgtcaggattttctctcatgaccatcctttcgtttactcgccggcagctagtttt
acccatccctctcttgtctctaagatggaggctctcgatcggctttcaggtatgcttcac
tacgacagaattgtcttgctggcccaaactgaagaggaaatggaggatttatctaatttg
caatccgaaatggtgaaaagagatgatatcatcacaagtatgattatgggacttgaacat
gaaagaatgaacttgaaacatagagtcatgaatttgatgaaccaagctgatgtcctagtg
aactggttgcgagttaatgatgcaaaatcactcgtgacaaagttagagggtgaaatggat
gatgatgatgcatttgaagctggcgatgaagattcaaaattgttgatagaattcttggcc
gcggatagtgccatagaggattcaatgtatgcgttggacaaggcagtcgagcacggagtg
gtaagttttgatgcatacttaaggcaggtaagaatgctggcaagagagcagttctttttg
agatctaagcttgtaaaattgagaggtcctagcatactccattggccttga
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integrated database retrieval system