Populus trichocarpa (black cottonwood): 7482913
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Entry
7482913 CDS
T01077
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
7482913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pop04121
]
7482913
Ubiquitin system [BR:
pop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
7482913
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
PAS_3
NANM
PAS
F-box-like
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
7482913
NCBI-ProteinID:
XP_002312465
UniProt:
B9HJG9
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Position
8:complement(8998034..9001625)
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AA seq
637 aa
AA seq
DB search
MSKPQEEKYEEEEELQSSGKRLKCAKSFKEKGEEEEEEEEEEELEREVSLMEDTRGGLFF
YPTNPTSFVVSDALELDFPIIYVNKVFQNFTGYQAHEVLGHNCRFLQYRDPHAQRRHPLV
DPDVVSEIRRCLEEGVEFQGELLNFRKDGTPLVNRLRLVPIHDDDGAITHIIAIQVFSEA
KIDLNHVSYPVFKETCNQLSDQSANYSLPRGQSTFTGHPEICGILQLSDEVLAHNILSRL
TPRDVASIASVCRRIRQLTKNEHVRKMVCQNAWGREVTGALELMTKKLGWGRLARELTTL
EAVRWRKLTVGGAVEPSRCNFSACAVGNRLVLFGGEGVNMQPMDDTFVLNLDAANPEWQR
ISVKSSPPGRWGHTLSCLNGSCLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGTPPL
PRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYMLDLTTDKPMWREIRTSWAPPSRLGHSL
SVYDRTKILMFGGLANSGHLRLRSGEAYTIDLEDEEPQWRQLECSALTGIGSQSSDVPPP
RLDHVAVSMPCGRILIFGGSIAGLHSPSQLFLLDPAEEKPSWRILNVPGQPPKFAWGHST
CVVGGTRVLVLGGHTGEEWILNELHELCLASRQDSEP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacctcaagaagaaaagtacgaggaagaagaagagttgcaaagctctggtaaa
aggctgaaatgcgccaaatccttcaaagaaaaaggggaggaggaagaagaagaggaggag
gaggaagaattggaaagagaggtttcattaatggaggacacaagaggagggttgtttttc
tacccaacgaatcccacatcttttgtagtttcggatgctttagagcttgattttcctatc
atttatgtcaacaaggtcttccagaacttcactggctaccaagctcacgaggtcctcggt
cataactgtcggttcttacaatacagggatcctcatgctcaaagaaggcatcctttagta
gatcctgatgttgtttctgaaatcagaagatgtcttgaggaaggggtggagttccaaggt
gaacttctaaactttaggaaggatggtactccattggtgaacaggctcagacttgtacct
atacatgacgatgatggagctatcacacacataatagctattcaggtattttcagaagcc
aaaatagatctgaaccatgtatcatatccagtcttcaaagagacttgcaatcagctgtct
gatcaatcagctaattattctcttccgcgtggacaatcaacattcactgggcatccagaa
atatgtggaatacttcagttgtctgatgaagtattggctcataacattttatcacgcttg
acgccaagggatgttgcatccattgcatctgtatgcagaagaatccggcaattaacaaaa
aatgagcatgtaaggaagatggtttgtcaaaatgcatggggaagagaagtcactggtgca
ttggagctgatgactaaaaagttgggctgggggcgtctggcaagggaactaactacgctt
gaggctgtgcgctggaggaaactgacagttggaggagctgttgagccttcacgctgcaat
ttcagtgcatgtgcagtaggaaatagacttgtattgtttggaggggaaggggtaaacatg
cagccaatggatgacacgtttgttctcaatctggatgctgcaaatccagagtggcagcgt
attagtgtgaaatcatccccaccagggcgctggggccacactctttcttgcctcaatggt
tcctgtttggtggtttttggaggatgtggtaggcaagggttgctcaatgatgtttttgtc
ctggacttggatgccaaacagcctacttggaaggaagtttctggcggaactccccctcta
cctagatcatggcatagctcttgcaccatagaaggttctaagctggttgtctcaggcgga
tgtacagatgccggggtacttctcagtgacacctacatgttggatctcactacagacaag
ccgatgtggagagagatccgaacttcttgggcacctccatctcgattagggcattcactc
tcagtttatgatcggacaaaaattcttatgtttggtggacttgccaacagtggacactta
cgactgagatcaggcgaggcctacaccattgacttggaggatgaagaaccacaatggagg
caactggagtgcagtgcattaacaggcattgggagccagagttctgatgtcccccctccc
agactagatcatgttgctgttagcatgccctgtggaaggattttaatctttggtggttct
attgctgggctgcactctccttctcagcttttcctgttggatcctgctgaggagaaacca
tcatggaggattctcaatgttcctggtcaaccaccaaagtttgcctggggtcatagcacc
tgtgtggttggagggaccagggtcctagtattggggggccacactggggaggaatggata
ctaaacgaattgcatgagttgtgcttagcaagcaggcaagactcagaaccatga
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