Populus trichocarpa (black cottonwood): 7484562
Help
Entry
7484562 CDS
T01077
Name
(RefSeq) chaperone protein ClpB3, chloroplastic
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pop03110
]
7484562
Chaperones and folding catalysts [BR:
pop03110
]
Heat shock proteins
HSP100
7484562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_18
Zeta_toxin
IstB_IS21
AAA_14
TniB
AAA_7
AAA_28
AAA_25
Mg_chelatase
AAA_24
Torsin
ABC_tran
ResIII
NBD_SMAX1
KIF9
Motif
Other DBs
NCBI-GeneID:
7484562
NCBI-ProteinID:
XP_024444871
LinkDB
All DBs
Position
17:complement(10358840..10365077)
Genome browser
AA seq
974 aa
AA seq
DB search
MATTATAASFTGVSLCPSSSSPLSHSASIRNALLPQKSLISFAGRRTSVKSLELKRNGAR
FQRTSRPTSFVVRCDASNGRITQQEFTDMAWQGIVSSPDVAKENKHQIVETEHLMKVLLE
QKNGLARRIFSKVGVDNTRLLEATDKFIQRQPKVLSDSAGSMLGRDLEALIQRAREYKKE
YGDSFVSVEHLVLAFTQDQRFGKQLFKDFQISLQTLKPAIESIRGRQSVIDQDPEGKYEA
LEKYGKDLTAMAKAGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLA
QRIVEGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLREVTDSDGQIILFIDEI
HTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVFVDQ
PTVADTVSILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEAAAK
LKMEITSKPTALDGINRSVLKLEMERLSLKNDTDKASKDRLSRLDAELSLLKKKQAELTE
QWEHEKSVMTRIQSIKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLGSAEKEL
DEYMKSGKSMLREEVTGDDIAEIVSKWTGIPVSKLKQSEKEKLLHLEEELHKRVVGQDPA
VKAVAEAIQRSRAGLSDPRRPIASFMFMGPTGVGKTELAKALASYMFNTEEALVRIDMSE
YMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNIFLQILDD
GRVTDSQGRTVSFTNTVIIMTSNVGSQYILDTDDDLPKEVAYETIKRRVMDAARSVFRPE
FMNRVDEYIVFQPLDRDQINSIVRLQLERVQQRLADRKIRVLVTDAAGDLLGTLGYDPNY
GARPVKRVIQQYVENELAKGILRGEFKDEDSVLIDTEVTAFANGQLPQQKLVFKRLQTSE
EKAAAENRVFSRTV
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaccgctacagcggcgtcgtttaccggagtgagtctgtgtccttcctcatca
tctcccctttcacattcagcttccattaggaatgctttgttgcctcaaaagtctcttatt
agtttcgctggaaggcggacttctgtgaagtcgcttgagttgaagagaaatggtgcccgt
tttcagaggactagtagacccacttcctttgttgttagatgtgatgcttctaatggaagg
attacacagcaagaatttacagacatggcatggcaaggaattgtatcttccccagatgtg
gcgaaagagaacaaacatcagatagtggagaccgagcatttgatgaaagtcctcttggag
caaaagaatggccttgctcgccgtatcttttccaaggttggggttgataatactcgtctt
cttgaagccaccgataaatttatccaacgccagcccaaggttctaagcgattctgctggt
tcaatgttgggacgtgacttggaggccctgatccaacgagccagagaatacaagaaagag
tatggggattcatttgtttctgttgagcatttggttcttgcattcactcaagatcaacga
tttgggaagcaattatttaaagattttcaaatatctctacaaactctgaaacctgcaata
gaatccataaggggacgccaatcagttatagaccaagatcctgaaggaaagtatgaagca
ctggagaagtatggaaaggatttgacagccatggcaaaagcaggaaagcttgacccagtt
attggcagggatgatgaaatccgtagatgcatccagattctctccaggagaacaaaaaac
aatccagtgctaattggtgaaccaggtgtggggaaaactgcaatttctgaagggcttgcc
cagagaattgtggaaggggatgttcctcaagctttgatgaaccgcaagctaatatccctt
gacatgggtgcactcattgctggggcaaaatatcgaggggaatttgaggatagattgaag
gctgtacttagggaagtcacggattcagatggtcagattatccttttcattgatgagatt
cacacagtggttggtgctggtgccacaaatggagcgatggatgcgggcaatctcttgaag
cctatgcttggcagaggagagttgcgctgcattggtgcaacaacactggatgagtatcgt
aagtatattgagaaagatcctgcattggagcgtcgtttccagcaagtttttgttgatcaa
cctacagtagcggatacagtatctatactccggggactgcgtgaaagatatgagctgcat
catggagtccgaatttctgacagtgcacttgtggaagcagcgattctgtctgatcgttac
atcagtggaagatttttacctgacaaagctattgatttagttgatgaagcagctgcaaaa
ctgaaaatggaaattacttcaaagcctactgcccttgatggaatcaaccgttcagtatta
aagctggagatggagaggttatctcttaaaaatgatacggataaagcttcaaaagatagg
ctgagccgccttgatgctgagttgtccctgttaaaaaagaaacaagctgagctgacagag
caatgggagcacgagaagtctgtcatgacacgcattcagtcaattaaggaagagattgac
agggtcaatcttgagattcagcaggctgagcgagagtatgatttaaatcgtgctgctgaa
ttgaagtacgggagcctgaattctttgcaacgccaacttggaagtgctgaaaaggagttg
gatgagtacatgaagtcaggaaagtccatgctgagagaagaagttacaggtgatgacatt
gctgaaattgttagcaagtggactggcatccctgtttccaagcttaaacaatctgagaag
gagaagctattgcatttggaagaagagctgcataaacgtgtggtgggtcaagaccctgca
gtgaaagcagtagctgaggccattcagcgatctcgtgctggtctctctgatcctcgccgt
ccaattgctagtttcatgttcatgggccccactggtgttggaaaaacagaactagctaaa
gccctagcttcctatatgttcaatactgaagaagcccttgtacgaattgatatgagcgaa
tacatggaaaagcatgcagtttcacgattaattggcgccccacctggttatgtagggtat
gaggaagggggccagttgacagagacagttcgtaggaggccatatgcagttattctcttt
gatgagatagaaaaggctcattctgatgtatttaatatcttccttcagattttggatgat
ggtagggtgactgattcacaaggtcgcacagtcagtttcacaaacactgtcatcattatg
acttcaaatgtgggttcacaatacatacttgacactgatgatgacttgccaaaggaggta
gcttatgaaacaattaagaggagggtaatggatgctgctagatcagtcttccgacctgag
ttcatgaacagggttgatgagtacatagttttccagcctctggatcgtgatcaaataaac
agcattgtcaggttacagcttgaacgtgtccagcaaaggcttgcagaccggaagataaga
gtattggttactgatgcagctggagaccttcttgggactcttggatacgatcccaactat
ggtgctaggccagtcaaaagggtgattcagcagtatgttgaaaacgaacttgccaagggt
atcttgagaggggaattcaaggatgaggattctgtcttaatagacaccgaggttacagca
tttgctaatgggcagctcccccagcaaaagctagttttcaagcgtcttcaaactagtgaa
gaaaaagcagctgcagaaaatcgagttttctcacgaactgtctga
DBGET
integrated database retrieval system
