Populus trichocarpa (black cottonwood): 7485696
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Entry
7485696 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7485696
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
7485696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7485696
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
7485696
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Ortholog
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Gene cluster
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Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
7485696
NCBI-ProteinID:
XP_006369531
UniProt:
A9PDL8
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All DBs
Position
1:26004074..26006989
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AA seq
388 aa
AA seq
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MRNFFRAKEKTLLLSKLIKAGESPASSSNASAAAYASFTFWGSLTQKLDPFSSFPSYQVL
YNKSCGLNLLKSVDMDRQDHHSSSFEQSYRCYPVSFIDKAHLEKGDKIIMPPSALDRLAT
LHIDYPMLFELHNPSAGRTSHCGVLEFIADEGMIYLPYWMMENMLLQEGDIVQLRNTSLE
KGTFVKLQPHTKDFLDISNPKAILETSLRNYSCLTTGDTIMVAYNNKKYYIDIVEAKPSS
AISIIETDCEVDFAPPLDYKEPEKPKSIPRSNKIPPEGMEEPAAKMPRFSAFTGSARRLD
GKPATQPTASTICPALKQHQPEAENNGSKLLSSLSHQQSGKLVFGSTSNQPQNETPKVPL
KKSTQEPPQKVEDPKFQAFTGKKYSLKG
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggaatttttttagagcgaaagaaaaaactctcctgctttctaaacttataaaagcc
ggagagagccctgcctcctcttcaaacgcttctgctgctgcttacgcttccttcaccttc
tggggttctctcacgcaaaagctcgacccgttttcatcgttccctagctaccaagttctc
tacaacaaatcttgtgggcttaacctgttgaagtcagtagacatggatcgccaagaccac
cacagttcatcatttgaacagagttaccgctgctaccctgtctctttcattgataaggca
catctggaaaagggggataaaattattatgcctccctcagctcttgatcgccttgcaacc
ttgcacattgactatccaatgctttttgaactccataatccttctgctggacgtacttct
cattgtggggttctagaatttattgcagatgagggcatgatatacttgccctactggatg
atggagaacatgctgctacaagagggggacattgtgcaattgagaaataccagcctggaa
aagggaacttttgtgaagctgcagccccacaccaaggacttcttagacatctccaatccc
aaagcaatcttggaaacttcattgaggaactactcttgtttaaccactggtgatacaata
atggttgcctataacaacaagaagtactacattgatatagttgaagcaaaaccctcttct
gcaattagtattattgaaacggactgtgaagtggattttgccccacctcttgattataaa
gaacctgaaaaaccaaaatcaattcctcgatcaaacaagatacctcctgaaggtatggaa
gagccagccgcaaagatgccaaggttcagtgcatttactggttcagcaaggcgcttggat
ggcaaaccagcgacacaaccaactgcatccactatctgccctgcgttgaaacaacaccaa
ccagaagctgagaacaatggctccaagttattaagctccttatcacatcagcagtctgga
aagcttgtgtttggttctacgtcaaaccaaccccaaaatgaaacaccaaaggttccctta
aagaaaagcactcaggagcctccccagaaggtggaagatccgaagtttcaagctttcacg
gggaagaagtattccctaaaaggctga
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