Populus trichocarpa (black cottonwood): 7485824
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Entry
7485824 CDS
T01077
Name
(RefSeq) ATP-citrate synthase beta chain protein 2
KO
K01648
ATP citrate (pro-S)-lyase [EC:
2.3.3.8
]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop00020
Citrate cycle (TCA cycle)
pop01100
Metabolic pathways
pop01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
7485824
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pop04147
]
7485824
Enzymes [BR:
pop01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.8 ATP citrate synthase
7485824
Exosome [BR:
pop04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
7485824
Exosomal proteins of bladder cancer cells
7485824
Exosomal proteins of melanoma cells
7485824
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-GeneID:
7485824
NCBI-ProteinID:
XP_052312715
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Position
10:15715830..15721798
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AA seq
608 aa
AA seq
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MATGQLFSRTTQALFYNYKQLPIQRMLDFDFLCGRELPSVAGIINPGAEGFQKLFFGQEE
IAIPVHSTVEAACTAHPTADVFINFASFRSAAASSMAALKQPTVRVVAIIAEGVPEADTK
QLIAYARANNKVVIGPATVGGIQAGAFKIGETAGTIDNIIACKLYRSGSVGFVSKSGGMS
NELYNAIARVTDGIYEGIAIGGDVFPGSTLSDHVLRFNNIPQVKIMVVLGELGGRDEYSL
VEALKQGKVNKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQAIKDAGAVVP
TSYEAFETAIKETFEKLVDEGKITPVKEFTPPQIPEDLNIAIKSGKVRAPTHIISTISDE
RGEEPCYAGVPMSSIVEQGYGVGDVISLLWFKRSLPRYCTHFMEICIMLCADHGPCVSGA
HNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDASRYFKDAYDKGLTPYEFVEGMKKKG
IRVPGIGHRIKRGDNRDKRVELLQRFARTHFPSVKYMEYAVLVETYTLSKANNLVLNIDG
AIGSLFLDLLAGSRMFTKPEIDEIVGIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHP
WEDVLYTK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggacaactcttctctcgaacaacacaagctttgttttacaattataagcag
ctgcctattcaacgcatgcttgattttgattttctatgtgggagggaattaccttctgta
gctggaattattaaccctggcgctgaggggtttcagaaactctttttcggtcaagaggaa
attgcaatccctgtgcattcgactgttgaggcagcttgcactgctcacccaactgctgat
gtgtttatcaacttcgcatcattcagaagtgcggctgcttcatccatggctgctctgaag
cagccaactgttcgagttgtggctatcatagctgagggtgttcctgaggcagacaccaag
caattgattgcatatgctcgggctaacaataaggttgtcattggtccggccactgttgga
ggcattcaagctggagcattcaagataggtgaaactgctggaacaattgataacataatt
gcttgcaagctttaccggtctggatctgttggatttgtctccaaatccggtggcatgtct
aatgagctgtataacgccattgcccgtgtaactgatggaatttatgaaggtattgcaatt
ggaggagatgtgttcccaggatctactctttctgatcatgttctgcggttcaacaacatc
ccacaggttaaaataatggttgtacttggggaacttggtggacgagatgagtattctcta
gttgaagccttaaaacagggaaaggtaaacaaaccagtggttgcttgggttagcggaact
tgtgcacgactctttaaatcagaagtacaatttggtcatgctggtgctaaaagtggtggt
gagatggaatccgctcaagcaaaaaatcaagcaataaaagatgccggagctgttgttccc
acttcatatgaagcttttgagactgcaattaaggaaacatttgagaaactggttgacgaa
ggaaagattacacctgtaaaggagtttacgcctccacaaatccctgaagatcttaacatt
gcaatcaagagcggaaaagtccgggcaccaacccatattatttctaccatctctgatgaa
agaggtgaggaaccgtgctatgctggcgtgccaatgtcttccattgttgaacagggttat
ggtgtgggtgatgtcatctctcttttatggttcaagcgcagccttccacgttactgtacc
cattttatggagatatgcatcatgttgtgtgctgaccatggtccctgtgtctctggtgct
cacaacactatagtaacagcaagggcaggaaaggacctagtttccagccttgtctcaggc
ttgctcacaattggtccccggtttggaggcgccattgatgatgcttctcggtacttcaag
gatgcttatgacaagggtctaacaccctacgagtttgttgaaggcatgaaaaagaagggg
attcgtgttccaggtatcgggcacaggatcaagagaggggacaacagggataaaagagta
gagcttctacaacggtttgctcgcacacatttcccttctgttaagtatatggagtatgct
gttctagtcgaaacctacactctttcaaaggccaataacttggtccttaacatcgatggc
gcgatagggtcccttttcttggatctccttgcaggtagcagaatgttcactaaaccagag
attgatgagattgttgggattggctatttgaatgggctctttgtgttggcacgttccatt
ggtttgattgggcacaccttcgaccagaagagattgaaacaacctctataccgtcaccca
tgggaggatgttctctacaccaagtga
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