Populus trichocarpa (black cottonwood): 7488385 Help Entry 7488385           CDS       T01077                                  Name (RefSeq) vacuolar-sorting protein BRO1   KO K12200   programmed cell death 6-interacting protein Organism pop  Populus trichocarpa (black cottonwood) Pathway pop03250   Viral life cycle - HIV-1 pop04144   Endocytosis Brite KEGG Orthology (KO) [BR:pop00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03250 Viral life cycle - HIV-1     7488385  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     7488385  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:pop04131]     7488385   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:pop04147]     7488385 Membrane trafficking [BR:pop04131]  Endosome - Lysosome transport   Endosomal sorting complexes required for transport (ESCRT)    ESCRT associated proteins     7488385 Exosome [BR:pop04147]  Exosomal proteins   Proteins found in most exosomes    7488385 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  BRO1 ALIX_LYPXL_bnd SOAR Motif Other DBs NCBI-GeneID:  7488385 NCBI-ProteinID:  XP_002311485 UniProt:  B9HJ83 LinkDB All DBs Position 8:8264081..8270083 Genome browser AA seq 869 aa AA seqDB search MAGQSSSTSTATNIMLAIHEKKTTSLDLYRPLRNYISMFYSEREAQNLEDDLQTVKQYRS DLERQPDPSPTSRRDLLQKYFKALCLIETRFPISPDSDHINTVTFVWYDAFKQKQKASQQ NIHLEKAAVLFNLGAVYSQMGLSFDRATVEGRRQAIHAFIAAAGSFAFLRDNAATKASMG TSTTVDLSVECVGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAALN VASLKDHFDKGWIAHVQLKAALFYAEACYRYSLELHEKEEIAEEIARLKSASSTLAEVKK SSRGAAAQILDAISKLEANINRNLDRAVKENDRVYLMRVPSPSSLPPLPAFSMVKIMPMN EVLDASKEKMFASLVPDSSAKALSRYTEMVDDIIRTQAEKLQQGSELTRVRLKEMDLPDS ILSLEGNFTLPTDLKEDVEAVQISGGPAGLEAELQQLMDLRRVNHELLVQTEELLQKEAT EDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAANLKQAADSDARIERSVRDHSALMSIL DRRPIESALPTLARPIMSLDANEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDV LPKLMTSTGSYEDLFRKEIAKYDPIREDIAQNIEAQEQLLLQIQAQNEEFSAVFNLEDYK ASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMI EDVQRQMAGLSFQDRKNTGSYSYPAVNQPHQTPRSSSQPPSDPQNVPHPRSQTSYYQPHE QSTMPAYAHPPSPYTTPQQPPPYHIPPAPGAPYPPPQVQQPTSQEYGQPAYPGWRGPYYN AHGQQSGSLPRPPYTIPGPYPPHQGYYKQ NT seq 2610 nt NT seq  +upstreamnt  +downstreamnt atggctggccaatcctcatccacatctacggccactaacatcatgctagcaattcacgag aaaaagacaacctccctcgacctctaccgtcctctccgcaactacatctccatgttttac tccgaacgcgaagctcaaaacctcgaagacgatctccaaaccgtcaaacagtaccgttcc gatcttgaacgccaacccgacccgtcccctacttcccgccgcgacctcctccaaaaatac tttaaagccctctgtttaatcgaaacccgattcccaatctcccccgacagcgatcacatc aatacggtcacgtttgtctggtacgatgcgtttaagcaaaaacagaaagcgtcgcaacag aatattcatttagagaaggctgctgtgctttttaatttgggtgccgtttatagtcagatg gggttgtcgtttgatcgggccacggtggaggggaggagacaggcgattcatgcgtttatt gctgccgctggatcgtttgctttcttgagagataatgcggcaacgaaagcgtccatgggg acgagtacgacggttgatttgtctgtcgagtgtgttgggatgttggagaggttgatgctt gcacaagcgcaggagtgtgtttttgagaatactattgctaaagggagtacgccgggtgtt tgtgccaagatttctcggcaggttgggttgtactacgaggaagctttagcagcactgaat gttgcatctctaaaagatcattttgacaagggttggattgcccatgtccaactaaaagca gctctattctatgcagaagcctgttaccggtatagtttggagcttcatgagaaagaagaa attgcagaagaaattgcacggttgaagagtgcgtctagtacgttagcagaggtgaagaaa agttcaaggggggctgcagcacagattctggatgcaattagcaagctggaagctaatatc aaccgcaatctggacagggctgtcaaggaaaatgatagagtttacctcatgagggttcct tcccctagttccttaccccctctcccagcattttccatggtaaagatcatgccaatgaac gaggtacttgatgccagcaaggaaaagatgtttgctagtcttgttccagacagcagtgca aaagctctttcaaggtacactgaaatggtcgatgatattatcaggacacaagctgaaaaa ttgcaacaagggagtgagctaactcgagtgaggctcaaagaaatggacctgccagattca attctttctttggaaggaaactttacgcttccaacagatcttaaagaagatgtggaagca gtgcaaattagtgggggcccagctggccttgaagctgagttacagcaacttatggatttg aggagggtaaaccatgaattgctggttcagaccgaggaacttctgcagaaggaagcaaca gaagatgcccaatttagaagtcaatttgggacacggtggactaggccccaatccagcact ttgacaaagaacttgcaggatagattaaataggtttgcagccaacttaaagcaagctgca gatagcgatgccagaattgagcgctcagtgagggatcattctgcgctcatgtcaattctt gatcgccgaccgatagaatctgcacttccaactttagctaggccaataatgtctttggat gctaatgaagatgctatagtgggggccttgaagcagagcttgaggcaattggagactctt ggcgctcaacgagctggtctcgaggacatgctcaaagagatgaaacggaaggatgatgtc ctgccaaagctgatgacatccactgggtcctatgaagatcttttcaggaaagagatagca aaatatgatcccatccgtgaagacattgcacaaaatattgaggcgcaagaacagttgttg ctgcaaattcaggctcaaaatgaagagttttctgctgtcttcaatcttgaagattacaaa gcatctcgtgagaagtgttataagcaaatacaggctgccatagccaagtatcgagaaata aaggagaacatcaacgagggattgaagttttatgttactcttcaggacgccatcaccaat atcaaacagcagtgcagtgattttgtgatgaccagaaatatccagtgtcgagaaatgatt gaagatgtgcaaagacaaatggctggactaagttttcaagatcgtaaaaacacaggctcg tacagctatcctgcagtaaaccagccccatcagactccaagatccagttcgcagcctcca tcggatcctcaaaatgttccacatcctcgctcccaaacatcgtactaccagcctcatgag caatctacaatgcctgcttatgcccaccctccatccccttatacaacaccacaacaacca cctccctatcatatcccccccgctcctggtgctccttacccacccccacaggttcaacaa ccaacaagccaggagtatggccagcctgcctatccagggtggcggggcccatattacaat gcccatggacaacaatctggatctctccctcggcctccttacactattccaggtccatac cctcctcaccaaggctactataaacaatag

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