Populus trichocarpa (black cottonwood): 7491116
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Entry
7491116 CDS
T01077
Name
(RefSeq) GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Pathway
pop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
7491116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pop03009
]
7491116
Ribosome biogenesis [BR:
pop03009
]
Eukaryotic type
Pre-60S particles
GTPases
7491116
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
Motif
Other DBs
NCBI-GeneID:
7491116
NCBI-ProteinID:
XP_006378981
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Position
9:complement(2894384..2899577)
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AA seq
602 aa
AA seq
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MGKNEKTRLGRALVKHHNQMIQESKEKGRYYKSQHKKVLESFTDVTEIDAVMEQVDEGEL
FSSSSSSVHHPVPNLLINLDTGSGVSDMTAEEKREKQKKEEALHASSLRVPRRPPWNAGM
SVEELDANEKQAFLTWRRSLASLEENENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDA
RDPLFYRCPDLEAYAREIDEHKRTLLLVNKADLLPFSVRQKWADYFRHLGILFLFWSAKA
ATAVLEGKILQGPWNEQATLQEMDDPDTKIYGRDELLARLQSEAETIVRIRSKSVSSGSG
PSNFQSSGGKFAGNSAPKHVVVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTL
IMSEKLTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRRVIEDVY
KINLPKPKPYEPQSRPPLASELLRTYCASRGYVGSSGLPDETRAARQILKDYIDGKLTHH
EIPPGISDEEGSDQDDAGSSLSETHQSDSSDTENPAENDGKNTPALEHVLDDLNSFDMAN
GLAHKKVTVKKPSASASASHKHHKKPQKKKDRSWRIENDGGDGMPVVRVFQKSVNTGPLK
TG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaacgagaaaacacgacttggaagagcactagtaaagcaccacaatcaaatg
attcaagaatccaaagaaaaaggccggtattacaaatcacaacacaagaaagttctcgaa
tccttcactgatgtcactgaaatagacgccgtcatggaacaagtcgacgaaggggaactt
ttctcctcctcctcctcctccgtccaccatcccgtccccaacctcctcatcaacctggac
acggggtctggagtgagtgatatgacggcagaagagaagagagagaagcagaagaaagag
gaggcgctgcatgctagtagtcttcgagttcctcgcaggccgccgtggaatgctggaatg
tcggtggaagagctagatgctaatgaaaagcaagcttttttaacctggcggcggagtctt
gctagccttgaggagaatgagaaccttgttcttactccatttgagaagaacctggatata
tggagacagctttggcgagtgcttgaacgcagtgatttgctggtaatggttgttgacgct
cgagaccccttgttctaccgctgccctgatcttgaggcatatgcacgggagattgatgaa
cacaaaaggaccctactccttgtaaacaaggctgatcttttacctttttcagtcaggcag
aaatgggcagattattttcgccatcttgggattctgtttctattctggtcagccaaggct
gctactgcagttcttgaggggaaaatactacagggcccctggaatgaacaagctaccctg
caagagatggatgaccctgatacaaaaatttatggaagggatgagcttttggcccgttta
cagtctgaggcagaaacaatagtcagaatcaggagcaaatcagtctccagtggctcaggc
ccatctaattttcagtcttctggcggaaagtttgcaggcaattcagctcccaagcatgtg
gtagtgggttttgttgggtatccgaatgtgggtaaaagctccacaatcaatgccttggtg
ggccagaagcgaacaggagtcacctctactccggggaagacaaagcatttccaaacactc
ataatgtctgagaagttgaccttatgtgattgcccaggattagttttcccttccttttca
agctcgagatatgaaatgattgcttcaggggtgttgccaattgatcgaatgacagagcac
agggaggctgtgcaggttgtagcaaaccgagttccaaggcgtgtcattgaggatgtctac
aaaataaacctgccaaaacctaagccatacgagcctcagtcccggcctcctttggcatca
gaattattgaggacatattgtgcttctcgagggtatgtaggatccagtggattgcctgat
gaaaccagagctgcccgtcaaattctgaaggattacatcgatgggaagctaactcaccat
gagattcccccgggaatatctgatgaggaaggaagcgatcaagatgatgcgggttccagc
ttgtccgaaacacaccagtcagattcatctgatactgaaaacccagctgaaaatgatggc
aaaaatacacctgcccttgagcatgtgctggatgatcttaattcatttgacatggccaat
ggacttgcccacaagaaggttaccgttaagaagccaagtgcctcagcctcagcctcgcac
aagcatcacaagaagcctcagaagaaaaaggatcgatcatggaggattgaaaatgatggt
ggtgatggaatgccggttgtaagagtcttccagaaatcggtgaacacaggtcctctcaag
actgggtaa
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