Populus trichocarpa (black cottonwood): 7492945
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Entry
7492945 CDS
T01077
Name
(RefSeq) tricalbin-3 isoform X1
KO
K28063
extended synaptotagmin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7492945
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
7492945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMP_MUG190-like
C2
PDZD8_N
SMP_LBD
MMM1
Motif
Other DBs
NCBI-GeneID:
7492945
NCBI-ProteinID:
XP_024466930
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Position
10:complement(17208215..17213976)
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AA seq
672 aa
AA seq
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MTLQSSSSSTNFNSYKILPLLCPCKSSNQTNYHPPLPFSKRRRKKLITNFTQQNLRRRFL
TFHACVIPNDTRNRNVNIELSKGTKGFVLKRISNELETEELSQEHSISNFTGFQEDPIVG
KLRTQLGVIHPIPSPPINRNIVGLFVFFFFVGVVFDKAWNSRKKDKSNEEGKRGEAWPQV
PTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWLIGLLQPVIDNLKKPDYVERV
EIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVG
VRDFDIDGELWVKLRLIPTEPWVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLKK
LLTEDLPRLFVRPKKIVLDFQKGKAVGPVANESGEMQEGNRDFVGELSVTLVDARKLSYV
FLGKTDPYVILNLGDQIMRSKKNSQTTVIGPPGEPIWNQDFHMLVTNPRKQKLNIQVKDS
LGFTGLTIGTGEVDLGSLQDTVPTDKIVVLRGGWGLFRKASSGEILLRLTYKAYVEDEDD
DKNEVEHVDTGASDDEMSDSDESNAIYEPSRRGSSNEMDKESFMDVLAALIVSEEFQGIV
ASETGNNKLSNDASGAGSAGSRSHTLNAESMPSDSNNSSEGSAGSILVWFAVITSILVLI
AVTLDGSSFFNP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcagtcttcttcttcttcaactaacttcaattcctataaaattctccctctc
ctctgcccatgtaaatcctccaatcaaaccaactaccacccaccactccctttctccaaa
agaagacgtaaaaaactaatcaccaacttcactcaacaaaatctcagaagaaggtttcta
actttccatgcttgtgtcatcccaaacgacactcgaaatcgcaatgtaaacattgagctt
tcaaagggcactaaggggtttgttttgaagcgaatttctaacgaattggagactgaagaa
ttatctcaagagcattccatttccaacttcactggctttcaagaagacccaatcgtcggc
aagttaaggacacaattaggagtgatacacccaataccatcgcctccaattaatagaaac
attgttgggttatttgtatttttcttttttgttggtgttgtttttgataaagcatggaat
tcaagaaagaaagataaaagcaatgaggaaggaaagcgtggtgaggcgtggccgcaagtg
cccaccagcttttctttgtttctggagaaggatttgcagagaaaagagtctgttgaatgg
gttaatatggtgttagggaagttgtggaaggtttacagaggtgggattgagaattggctc
attgggttgttgcagcctgttattgataatttgaagaagcctgattatgttgagagagtt
gaaattaagcagttctctttaggggatgaaccattgtctgttaggaatgttgagaggaga
acttctcgccgtgtcaacgatttgcagtatcaaataggcctcagatatactggtggtgct
cggatgctgctaatgctgtcgctaaaatttggcattatccccattgtggtgccagttggt
gttcgagattttgatattgatggtgaactttgggtcaaattgcggttgataccaacagag
ccatgggtgggagctgtttcatgggcttttgtgtcactcccgaagatcaaatttgaactt
tcaccatttcgtttgttcaatctaatggcaattcctgttctctcaatgtttctgaaaaaa
cttctcactgaggatttgcctcgactgtttgttcgtcctaagaagattgttttggatttt
caaaaaggaaaagcggttggccctgttgcaaatgaatcaggagaaatgcaagaaggaaac
agggattttgttggagaactatcagtcactcttgtagatgcccgaaaactttcctacgtc
ttccttggtaaaacagacccatatgttattctgaacctgggagatcaaattatgcgcagt
aaaaagaatagtcaaactactgtcattgggcctcctggtgaaccaatttggaatcaggat
tttcacatgcttgttacaaaccccaggaaacaaaaattgaacatccaagtgaaagactct
cttggattcacgggtttaactattggcacaggagaggttgatttgggatctttgcaagat
actgtaccaactgacaagattgtggttctgcgaggaggttggggattgttcagaaaagct
tcttctggagagattctccttcgactaacttataaagcctatgttgaggatgaagatgat
gataagaatgaggtggagcatgttgatacaggtgcttcagatgatgagatgtctgattct
gatgaatcaaatgctatctatgagcctagtagaaggggttcttcaaatgagatggataaa
gagtcatttatggatgttctagcagctttgattgtgagtgaggaatttcaaggaatagtg
gcgtctgagacaggaaataacaaactttccaatgatgcctcaggtgcaggatctgctgga
tcacgctcacatactcttaatgctgaatcaatgccctcagatagcaataacagttctgaa
ggttctgctggatcaatcttagtttggtttgcggtgattacaagtatattagttctaatt
gctgtcactttggatggttcaagtttcttcaacccttga
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