KEGG   Populus trichocarpa (black cottonwood): 7493517
Entry
7493517           CDS       T01077                                 
Name
(RefSeq) zinc finger protein BRUTUS isoform X1
  KO
K16276  zinc finger protein-like protein
Organism
pop  Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:pop00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pop04121]
    7493517
Ubiquitin system [BR:pop04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    7493517
SSDB
Motif
Pfam: Hemerythrin zinc_ribbon_6 zf-CHY zf-RING_2 Lenti_VIF_2
Other DBs
NCBI-GeneID: 7493517
NCBI-ProteinID: XP_024438189
LinkDB
Position
12:5267416..5276753
AA seq 1240 aa
MATSLPEIQQCGEGVVLSKSAKRVDSKGGLESEEEDTKSPILIFLYFHKAIRNELDTLHL
LTLAFATGHQTVEIKPLFQRYRFLRLVYKYHSNAEDEVIFPALDNRVKNVANSYSLEHKG
ESNLFDQLFELLNSYTQNDESFPRELASCTGVLQTSLSQHMAKEEQQVFPLLIEKFSVEE
QASLVWQFICSIPVNMLAEFLPWLSSSISPVEYQDMLKCLSMIIPKEKLLQQVIFTWMEG
KKSTDAVESYVDNHEVLSQKDSPTSMLILELDKEKCTCKKSKTGKRKYLEPSNEDSDTME
THPIDEILLWHNAIKRELNEIADEAKKIQSSGDFTNLSAFDERLQFIAEVCIFHSIAEDK
VIFPAVGGEFSFSKEHAEEETQFNEFRCLIESIQSAGASSNSVADFYAKLCSHADQIIET
IQRHFHNEEIQVLPLARQHFSFRKQKELLYQSLCMMPLKVIERVLPWLVGLLTEHEARNF
LKNMQSAAPAVDTALVTLFTGWACKGRSQGVCLSSSVIHCCPADIEEKIVPSCCARLCAF
CSKDSPVSISEGIKRPQKRNISGSCKNSNVCNPIETPDAHEPSCSDRSCCVPGLGVNSKN
LGLTSLSTTKSLRSLSVKSSAPALNSSLFVWESDMVSSDLGYTERPIDTIFKFHKAISKD
LEYLDVESGNLSDCDEAFLQQFIGRFRLLWGLYRAHSNAEDEIVFPALESKEALHNVSHS
YTLDHKQEEELFEDISFVLSELSHLHENLQKFQVMEDPTGSTLEHSIGHLDDYMGKYNEL
ATKIQWMCKSIRVTLDQHINREELELWPLFDRHFSIQEQDRLVGRIIGTTGAEVLQSMLP
WVTSALTQDEQNKMMDTWKQATRNTMFNEWLNECWKETSASLVQTEPSGDTIYKEGREFQ
ESLDQSDLFKPGWKDIFRMNQNELESEIRKVYRDSTLDPRRKSYLVQNLLTSRWIAAQQK
SPQETAGENSTAADVMGCFPTFRDPEKQVYGCEHYKRSCKLRASCCGKLFACRFCHDKVS
DHTMDRKATLEMMCMRCLKVQPVGQICATPTCNGLSMAKYYCNICKFFDDERSVYHCPFC
NLCRVGKGLGIDFFHCMTCNCCLGIKSVNHKCLEKGLETNCPICCDFLFTSSAPVRALPC
GHYMHSSCFQAYTCSHYTCPICCKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCND
CDQKGSAQFHWLYHKCGLCGSYNTRVIKNEVTHPICTTRL
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggcgacgtcgttaccggaaatacagcagtgtggagagggagtagttttgtcaaaatcg
gcgaagagagtggattcgaaaggtggtttagaaagcgaagaagaagacacgaaatcgccg
attttgatatttttgtactttcataaggcgattcggaatgagcttgacacgcttcaccta
ttaaccctggcttttgctaccggtcatcagactgtggagattaaaccgctctttcaacgt
taccggtttctccgcttggtttataagtatcactctaatgctgaagatgaggtcatcttt
ccagctcttgataatcgtgtgaagaatgtggcaaactcgtattcattagaacacaagggt
gaaagcaatcttttcgatcaattatttgagcttctaaattcttacactcaaaatgatgaa
agttttccacgtgagttagcatcctgtaccggagtgcttcagacatcacttagtcagcat
atggccaaggaagagcagcaggtttttcccttgcttattgagaagttctcagtcgaagag
caggcatctctagtctggcagtttatatgcagcattcctgttaacatgttggctgagttt
ctgccttggctttcatcctctatttcaccagttgaataccaagacatgctcaagtgccta
agcatgataattccaaaggaaaagcttctgcaacaggttattttcacctggatggaaggg
aagaagagcacagatgcagttgaaagttatgtagataatcatgaggttttaagccagaag
gattctcctacaagcatgttaattttggaactggataaagaaaaatgtacctgtaagaaa
tccaagactgggaaaaggaaatatttggagccaagtaatgaggattctgataccatggaa
acacatccaatagatgaaattcttctttggcataatgctattaagagggagttaaatgaa
atagctgacgaggctaagaagatacaaagctctggagattttactaatttatcagcattt
gatgagcggctgcaattcattgctgaagtttgcatcttccacagtattgctgaggacaaa
gtcatatttcctgctgtaggtggagaattttcattctcaaaagagcatgcagaagaagaa
actcaatttaacgagttcagatgtttaattgaaagcattcaaagtgcaggtgcaagctct
aactctgtagctgatttttatgcaaagctatgctcgcatgctgatcaaataatagaaact
atacaaaggcacttccacaatgaggaaattcaggttctcccacttgcccgtcagcacttt
agcttcagaaaacagaaggaacttttataccagagcttgtgcatgatgcctttgaaagtg
attgagcgtgtcttgccatggctggtggggttgttaacagaacacgaggccaggaatttc
ctaaaaaatatgcaatcagcagctccagcagtagacacagctcttgtaactctttttact
ggttgggcatgcaagggtcgtagccaaggtgtgtgtttgtcttcaagtgtaattcattgc
tgtcctgctgatattgaggaaaaaattgttccatcatgctgtgcgcgtttgtgtgcgttt
tgttcaaaggatagtcctgtgtcaatcagtgaaggtatcaaaaggccacaaaaaagaaac
atctcaggatcttgcaaaaatagcaatgtctgcaaccccatagagactccggatgcccat
gaaccatcttgttctgatcggtcttgttgtgtcccaggtttgggagtaaacagcaaaaat
ctgggattgacttctctttccacaaccaagtctttgcgatcattatctgtcaaatcctct
gctccagcccttaactccagtctttttgtctgggaatcagatatggtctcttctgatttg
gggtatacagaacgaccgatagatactatttttaaatttcataaagccataagcaaagac
ttggagtatcttgatgttgaatctggaaacctcagtgattgcgatgaggcatttcttcag
cagttcattggaagattccgtctattatggggcttatacagagctcatagcaatgctgag
gatgaaattgtttttccagcgttagagtctaaagaggcacttcataatgttagccattct
tatacactagaccataagcaggaggaagaattatttgaagacatttcatttgtcctttct
gagctttcacaccttcatgaaaatttgcaaaagtttcaagtgatggaggacccaacagga
agtactctggagcattctattggccatctcgatgattatatgggaaagtacaatgagcta
gccactaagattcaatggatgtgcaaatctataagagttactttagatcaacatattaat
agagaagaacttgagttgtggccattgtttgacaggcatttttcaattcaggagcaagac
aggttagttggtcgcataattgggacgacgggggctgaagtactgcaatctatgttgcct
tgggttacttctgccctgactcaagatgaacaaaataaaatgatggacacatggaaacag
gcaacaagaaacacaatgtttaatgagtggcttaatgaatgctggaaagaaacttcagca
tcacttgtgcagactgaaccatcaggagatacaatttataaagaaggcagagagtttcaa
gaaagtttagaccaaagtgatctgtttaagcctgggtggaaagatatcttccgcatgaat
caaaatgagcttgaatctgagattagaaaggtttatagggactcgactcttgatcctagg
agaaaatcatatcttgttcaaaatcttctaacaagccgctggatagctgctcagcaaaag
tcacctcaagaaactgcaggggaaaattctactgctgctgatgtaatgggatgcttccca
acatttcgagaccctgaaaaacaagtatatgggtgtgaacactacaagagaagctgtaaa
cttcgggcttcttgttgtggtaagctgtttgcttgcagattttgccatgacaaagttagt
gatcacactatggacagaaaagcaacattggaaatgatgtgcatgcgctgcctgaaggtc
caaccagtagggcaaatctgtgcaacaccaacatgcaatggtctttcaatggcgaaatat
tattgcaacatatgcaagttttttgatgatgaaaggagtgtatatcattgcccattttgc
aatttatgccgtgttgggaagggtcttggtattgatttctttcattgcatgacttgcaac
tgttgtctggggattaagtcagtgaaccacaagtgcctggagaaaggtttagaaactaac
tgccccatttgctgcgattttttattcacatcaagtgcaccagtcagagctttaccttgt
ggccattatatgcattcctcatgctttcaggcatatacttgcagtcactatacttgtcca
atatgctgcaaatccttgggagatatggcggtttatttcggcatgcttgatgcattgttg
gctgccgaggagctgccagaggaatacagggatcgttgtcaggatatactgtgcaatgat
tgtgatcaaaaggggtctgcacaattccactggttatatcacaagtgtggattatgtggg
tcttataacacccgggtaatcaagaatgaggtgacccatcccatctgcaccactcgtctc
tga

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