Populus trichocarpa (black cottonwood): 7493981
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Entry
7493981 CDS
T01077
Name
(RefSeq) synaptotagmin-2 isoform X1
KO
K28063
extended synaptotagmin
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pop04131
]
7493981
Membrane trafficking [BR:
pop04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
7493981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2
SMP_LBD
SMP_MUG190-like
NT-C2
Ehbp
Motif
Other DBs
NCBI-GeneID:
7493981
NCBI-ProteinID:
XP_002307735
UniProt:
B9H501
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Position
5:complement(23835957..23841084)
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AA seq
537 aa
AA seq
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MGILSSILGFCGFGVGTSIGIVIGYYMFIYFEPTDVKDPVVRPLIEQDSKTLQRLLPEIP
QWVKNPDYDRVDWLNKLIENMWPYLDTAICKTAKTIAKPIIAELIPKYKIDSVEFETLTL
GSLPPTFPGMKVYVTGEKELIMEPVLKWAGNPNIIIAVKAFGLKATVQVVDLQVFATPRI
TLKPLVPSFPCFANIYVSLLQKPHVDFGLKLLGADAMSIPGLYKFVQELIKDQVASMYLW
PKTLVVPIVDASKAMKRPVGILTVKVLKATELKKKDLLGGSDPYVKLKLTEDALPSKKTT
VKNKNLNPEWNEEFNITVKDPESQALEILVYDWEQVGKHDKMGMNVIPLKDLTPDEQKVM
TLDLLKNMDPNDVQNKKSRGQIVVEVVYKPFKDLEAEKDIVDPSAVGKAPEGTPAGGGLL
VVIVHEAQDVEGKHHTNPYVRLLFKGEDKRTKQVKKNRDPRWGEDFQFTLDEPPTNERLH
VEVLSSSKMSLLHSKENLGYVIINLADVVTNRRINEKYNLIDSRNGQIQIELQWKTS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgggaatattgagtagtatattgggattttgtggttttggagtaggaacgtcaattggg
attgtaattgggtactacatgtttatctattttgagccaactgatgtcaaggatcctgta
gtccgtcctttgattgaacaagactcgaaaactttacaacgtctgcttccagaaataccc
cagtgggtgaaaaatccagactatgatcgggttgactggcttaacaaattgattgagaac
atgtggccttacctagatacggcaatctgcaagactgcaaagactatagcgaagcccatt
attgctgagctaattccaaaatacaaaattgactctgttgaattcgaaacacttaccttg
ggctccctgccaccaacttttccaggaatgaaagtttatgtcactggtgagaaagagctg
atcatggaaccggtattgaagtgggctgggaatccaaatattatcattgcagttaaagca
tttggtctgaaagccacagttcaggtggttgatttgcaagtatttgccactccacgtatc
accctaaagcctttggttccttcatttccttgttttgccaatatatatgtgtctctgcta
cagaagccacatgttgactttggattgaaattgcttggagctgatgctatgtccattcct
ggcctgtacaaatttgtccaggagcttatcaaagatcaggttgcaagtatgtatttatgg
ccaaaaaccctagtagtgccaatcgtggatgcttcaaaagccatgaagcgacctgttggg
atactcactgtgaaggttctgaaggcaacggagcttaaaaagaaagatctgttaggggga
tcagacccatatgtgaaattaaagcttactgaagatgcgcttccttcaaagaaaacaact
gttaaaaacaaaaacttgaaccccgaatggaatgaggagtttaatatcaccgttaaggac
ccagaatctcaagccttggagattcttgtctacgattgggaacaggttggcaaacacgac
aagatgggtatgaatgtcattccattgaaagatctgacaccggatgagcaaaaggttatg
actcttgatctgctaaaaaatatggatccaaatgatgttcaaaataagaaatcacgtgga
cagattgttgttgaagtggtatacaaaccttttaaggatctcgaggcagaaaaggatata
gttgatccaagtgcagtgggaaaagctcctgaaggaacacctgctggtggtggtctgtta
gtagttattgtacatgaagctcaagatgttgaagggaagcaccacacaaatccttatgtt
cgattacttttcaaaggggaggacaaaagaactaagcaagtgaagaaaaatagagatcca
agatggggggaggattttcagttcacgctggacgaaccacctacaaatgaaagacttcat
gtggaagttcttagttcctcaaagatgtctctacttcactctaaggaaaacctgggttat
gtgattataaacctagcagatgtcgtgacaaacaggagaatcaacgagaagtacaatctc
attgactccaggaatggtcaaatccaaattgagctgcaatggaaaacatcttga
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