Populus trichocarpa (black cottonwood): 7495139
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Entry
7495139 CDS
T01077
Name
(RefSeq) uncharacterized protein LOC7495139
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
pop
Populus trichocarpa (black cottonwood)
Brite
KEGG Orthology (KO) [BR:
pop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pop03016
]
7495139
Transfer RNA biogenesis [BR:
pop03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
7495139
Prokaryotic type
Methyltransferases
7495139
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Roc
RsgA_GTPase
Ras
GTP_EFTU
AIG1
Motif
Other DBs
NCBI-GeneID:
7495139
NCBI-ProteinID:
XP_002301037
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Position
2:6717064..6720591
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AA seq
550 aa
AA seq
DB search
MALLPVFRTIITHFFKPKTLNPSLSPLFQEPTVKNLSFLAKHKTLPKPHASLNSKTTLLL
NGQDQRFMGLNGTDDKSISTTIAAIVTSVGGPPASVGIVRLSGPSAVEIAARVFKPMRKK
KKKGFCVWKPTSHVVDYGVVLDHQGNVVDEVLAVPMLAPRSYTREDVVELQCHGTEVCLR
RVLRACIEAGARLAEPGEFTLRAFLNGRLDLSQAENVGKLISSKSVAAADAALAGIQGGF
ASLVKSLRTQCIELLTEIEARLDFDDEMPPLDLNLIMDKIHSMSENVENALKTANYDKLL
QSGLQIAIVGRPNVGKSSLLNAWSKSERAIVTEIAGTTRDIVEASITVGGIPVILLDTAG
IRVTDDVVEKIGVERSEAVALGADVIVMTVSALDGWTPEDTELLNRIVSKKKSVGSFTPM
ILVVNKIDCSLSLCSEWVDRGGGSFSKHVFTCAITGQGIQDLEMAISEIVGLNKIPAGGL
KWTVNHRQCEQLVRMKEALVRLKSSIEEEMPLDFWTIDLRDAALALGQISGENISEEILS
NIFGKFCIGK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctcttctccctgtatttcgcactatcatcacccatttcttcaaacctaaaacccta
aacccttccctctcaccactcttccaagaacctactgttaaaaatctttcctttctcgcc
aagcacaaaacccttccgaaaccccatgcctctctcaattcaaaaaccactttacttctc
aatggtcaagaccagcgctttatgggcctaaatggtactgacgacaagtcgatatctacc
actattgcagccattgtaacctccgtgggtggcccacctgcttccgtggggattgtcagg
ttatctggtccatctgccgtcgagattgctgcacgtgtgtttaaaccaatgagaaaaaag
aagaaaaaaggattttgtgtgtggaagcctaccagtcatgtcgtagattacggggtggtt
ttggatcatcaagggaatgtagttgatgaggttttagctgtacccatgttggctccaagg
tcttacactagagaagatgtggttgagcttcagtgtcacgggactgaagtctgtcttcgt
cgtgtgctgagagcttgtatagaagctggagccaggcttgcagaaccaggtgagttcact
ctacgtgcatttctaaatggccggctggacctttcgcaagctgaaaatgttggaaagctt
atatcatccaaatccgtggctgctgcagatgcagccctcgctggaattcagggaggcttt
gcttctttggtcaaatcactaagaacgcaatgcattgagctgcttactgagattgaagct
cgtttagactttgatgatgagatgccgccactagatttgaatttaatcatggataaaata
cattccatgtcagaaaatgtggagaatgcactcaagacagccaattacgacaagcttttg
caatctggattacagatagcaattgttggccgtcctaatgttgggaagtccagcctcctt
aacgcatggagcaaaagtgagcgggcaatagttacagaaattgctggaaccacccgtgac
attgttgaagccagtattacagttggtggcatccctgtgatccttcttgatactgctggg
atcagggtgactgatgatgttgtcgagaagattggtgtagaaagatctgaagcagttgcc
ctgggtgctgatgtcattgttatgacagttagtgctcttgatggatggacaccagaagac
accgaacttttgaataggattgtatctaagaagaaatcagttggctcttttacaccaatg
atccttgtagttaacaaaatagactgttctctgtccttgtgttcggaatgggttgatagg
ggtggtggttcttttagtaagcatgttttcacctgtgctattactggtcaaggaattcaa
gatttagagatggcaatttcagagattgtgggtcttaacaaaattcctgcggggggactc
aaatggactgtcaaccatagacaatgtgaacagcttgtgcggatgaaggaggctcttgta
aggttgaaatcttcaattgaggaggaaatgcccctggatttttggactattgatttgagg
gatgctgcattggctctcggacagataagtggagaaaacatctctgaagagattttgtca
aacatttttggtaaattctgtatcggtaaatag
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