Panulirus ornatus (ornate spiny lobster): 139746364
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Entry
139746364 CDS
T10834
Symbol
DNAlig3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139746364 (DNAlig3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porn03400
]
139746364 (DNAlig3)
Enzymes [BR:
porn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
139746364 (DNAlig3)
DNA repair and recombination proteins [BR:
porn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
139746364 (DNAlig3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
zf-PARP
LIG3_BRCT
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
zf-CCHH
AbiTii
Motif
Other DBs
NCBI-GeneID:
139746364
NCBI-ProteinID:
XP_071513662
LinkDB
All DBs
Position
64:1181433..1252767
Genome browser
AA seq
1065 aa
AA seq
DB search
MIRGPLTSSYQFDKALAKFILTRTRRAVEPAYGIALPTFTRGKFLIRNKLQSSSDVNSRS
LYSSLKILRPLAHSHLFNLDLLGCSEMSSFPFCADYDKRGAAKCKKCKEKCEKGALRIGK
IVPNPFSESGGDMKQWHHVDCIFDMFKRARATTKKIEDPVEDIEGWEIVEEDDRKKIRLL
IDDLQETVSQKKNTPKKQTPSKKAGQQTSKNAVAESQKKVKQNLSAMPDPSPSKVSPPSG
IKPSPSKTPPPPRMDPGMDRTHKDNAFREFRRICANIAEESSYLGKTEILSNFFKYGTNK
TEFQGDLRLWVKLLLPGVVKRVYNLQSKQLIKLFSQIFGTNLEEMIEDLEQGDVAETVRK
FFEQSTILPPIKKSFLSIQEVDELLEELVGKTRDEEQSMVLKKSAKKCTANDLKMVVRLI
KADLRINAGAKHILDAVHSDAYEAFQTTRNIDAVLDQILSASSSDVNLKMTAQVMTPVLP
MLAEACKSVDYAFKKCPSGAMFAEIKYDGERVQVHQNGNKFAYFSRSLKPVMPHKVSHFK
EYIPKAFPHGKDLILDSEVLLIDTRTGNPLPFGTLGVHKKAEFQDANVCLFVFDCIHYNG
EDLMNKPLKERRKILEENMNEIKNHIMFSEMKLINKKVDLRDMINRVLKQGLEGLVLKDI
NSIYEPGKRHWLKIKKDYLNDGAMADTADLVILGAWYGTGKKGGMMSVFLMGCYDTRINK
WCTVTKVHTGIDDARLEQLQTELDMVKISQDADRVPSWLKCNKPMVPDFVATDPKASPVW
EITGAEFTRHQIHTADGISIRFPRVTRERSDKTWEEATNLAELQILYKNSREAMEFEALA
SDSAGRTDDDDSSKKSGGSGSSTPVRTPANAGSASHGSLSSSSLNKRSTEKNKNKAERTL
SGLHKGGNMKQEDKNEDQKRKDKEKYDKKEGKRKSDDSVEDIPLKKACKYGVSCHNENVA
HLHLYEHPAPICLKPPTINPLPDIFHGVQVSIPHTIDKIDVLKRYIIAYGGVVLPDHQSC
DATHLIVTGKDVSSPASYKGKRVVVGWLWDSIKLQKLQPTRLYNS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgataagaggaccactgacatcatcttaccagtttgataaagctttggcaaagtttata
ctaacacgcaccaggagggctgtagaacctgcctatggtattgctctgcccaccttcacc
aggggtaaatttctcatcagaaacaagcttcaaagctcatctgatgtaaattcaaggtct
ctttactcttcgttaaagattttgagaccacttgcacatagtcacctgttcaacttagat
cttcttggctgttcagaaatgtcatccttcccattctgtgcagattatgacaaaaggggt
gctgcaaaatgtaagaaatgcaaggagaaatgcgaaaaaggggctttacgaataggtaaa
attgttcccaatcccttttcggagtctggtggagacatgaagcagtggcatcatgtagat
tgcatatttgatatgttcaaacgtgcccgagctaccactaagaagatagaagaccctgta
gaagacattgaaggttgggaaatagtagaagaagatgatagaaaaaagattcgtctcttg
attgatgaccttcaggaaactgtatctcagaaaaaaaacacgcccaagaagcaaactccc
tccaaaaaagcaggtcaacagacatcaaaaaatgcagttgcagaaagtcagaagaaagtc
aagcaaaacctttcagcaatgccagatcctagcccctcaaaagtttcaccgccttcagga
ataaagcctagcccttccaaaactccacctcctccaaggatggaccctggcatggataga
actcacaaagacaatgcctttagggaatttcgtcggatttgtgcaaatattgcagaagag
tcaagttatttgggcaaaactgaaatactttccaatttcttcaagtatggcactaataaa
actgagtttcagggtgacttaagactgtgggtgaagcttctcctcccaggagttgtaaag
cgggtctacaacctccagtccaagcagctcatcaaacttttttcccaaatatttggcact
aatctagaggagatgatagaagacttagagcagggtgatgtagcagagacagtaaggaaa
ttttttgaacagtccaccattttgccccccattaagaagagctttctgtccatccaagaa
gttgatgaattgttagaggaattggtggggaagacaagagatgaggaacagtctatggtt
cttaagaagagtgcaaaaaagtgtacagctaatgatttaaagatggtggtccgtctgatc
aaagcagatttgcgtatcaatgcgggagccaaacacatcttggatgctgttcatagtgat
gcctatgaagcattccagacaacacgtaacatagatgcagtactggaccagattctgtca
gcaagtagttctgatgtcaacttgaaaatgacagcacaagtcatgactcctgttctccct
atgctggctgaggcatgtaaatcagtagattatgcatttaagaagtgtccaagtggagct
atgtttgctgagataaagtatgatggagaaagagttcaggtccatcagaatggcaacaaa
tttgcatacttttcacgttctctcaaacctgtgatgcctcacaaggtttcccatttcaag
gaatacataccaaaggctttccctcatggcaaagatctcattcttgattctgaggtattg
ttaattgatactagaaccggaaaccctttgccctttggaacattaggagtccataagaaa
gcagagttccaggatgccaacgtgtgcctttttgtctttgactgtattcattataatgga
gaagatttgatgaacaagcctctaaaagaacgccgtaagatccttgaggagaacatgaat
gagataaaaaatcatatcatgttctcagagatgaaactaatcaacaaaaaagtggactta
cgggatatgatcaacagagtactgaagcagggacttgaaggactagttcttaaagatatt
aatagtatttatgaacctggaaagcgtcattggctaaagatcaagaaagactacttgaat
gatggagcaatggctgatactgctgacttggtgatattgggggcctggtatggaactggc
aaaaaaggaggaatgatgtctgtttttctcatgggatgctatgatactagaattaacaag
tggtgcacagtcactaaggtgcatacaggcattgatgatgcacgcttggagcagcttcaa
acagaattagatatggtgaagatcagtcaagatgcagaccgtgtcccctcatggttaaaa
tgtaataaacccatggttcctgactttgtggctacagatccaaaagcatcaccagtttgg
gaaattactggagcagaatttactcgtcaccagatccacacagcagatggaatctcaatt
agatttccacgtgtcaccagagaacgtagtgacaagacatgggaagaggccacaaattta
gcagaactccaaattctttataagaactccagagaagctatggaatttgaagcattagcc
tctgacagtgctggcaggacagatgatgatgatagcagcaagaagagtggagggtctggt
tcatctacacctgtaagaactccagcaaatgcaggatcagcaagtcatggatcgcttagt
tcatcatcactaaataagcgaagcacagagaaaaacaagaataaggctgagagaactctt
agtggacttcataaaggtggaaatatgaagcaagaggataaaaatgaagaccagaaaagg
aaagataaagaaaagtatgacaagaaggaagggaaaagaaaatcagatgattctgtagaa
gatattccattaaagaaggcatgcaagtatggtgtcagttgtcataatgaaaatgtggct
cacttgcatctgtatgaacatccagcaccaatttgtcttaaacctccaacaataaatcca
ctgcctgatatatttcatggtgttcaagtcagcattccacacaccatagacaagatcgat
gtgctgaaaagatacataattgcatacggaggcgtcgtgctgccggatcatcagtcatgt
gatgctacgcaccttatcgtcactggcaaggatgtgtcatcaccagcatcatacaaagga
aaaagagtggtggtcggatggctgtgggatagcatcaagttgcaaaagcttcagcctacc
agactatataacagttag
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integrated database retrieval system
