Panulirus ornatus (ornate spiny lobster): 139752059
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Entry
139752059 CDS
T10834
Symbol
rempA
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
porn Panulirus ornatus (ornate spiny lobster)
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
porn03037
]
139752059 (rempA)
Cilium and associated proteins [BR:
porn03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
139752059 (rempA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR19_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
TPR_GEMI5
TPR_COPA_B
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
TPR_IFT80_172
EIF3I
Clathrin
SNAP
VPS8_N
Motif
Other DBs
NCBI-GeneID:
139752059
NCBI-ProteinID:
XP_071523998
LinkDB
All DBs
Position
12:complement(53706607..53814042)
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AA seq
1482 aa
AA seq
DB search
MSLYFDCIVDSPHTSAINTQISWHPQASCLAVAAYSEDKGGAVNVYTGEGKLCDEVDIPP
HPTAQVTSVMWHPSKRILAVGWESGELFLWNDHEHELHEIQSLHRAPISILMFSAAGTRL
VSADASGSTVGWRVDNSGNLQTVFTHELKDPLVQIVYRVSINTDKNLSTLDINGLARAAV
SGDERALDIFSSWRPRTGHKRLSLAANAKDNLNFFLGSSTGVLYHVSDSGNCVEVLQADG
GIKCLLHHESRNLLVVITEGMVLGQFSVALDGSVTEVNKVKLSGRTNDIQVTWAGSGLLA
VSTGDSSVRLWNLDSGDNYVLSLQGPSYRDQEYVMCLSYSENKKILCAGTNLGSVAMWKF
EEHKLGEDEYMKDPEKDWKLQNPTVISGAVKQVSWGSTQNLLAVNTVRDVYILNEQHMVA
SYKDQVSVVQVSPTQLSVDIFSGGSHLELRAEIQVRGVHNTVDHLLLWNMKKMVVYEITS
DATHLRVVASFPCEAESAVLHEGSTYSIEGGSVQVRSLQGTVKQTLNFTESEGEPIGLDV
CGNFLVTASLQGIVKLWDLSRREAKPHTQGKHMSETIKDFGEIISARCNCNGTRVSIAVA
QTSLLPDPKLYIWDIENDNITYFNFASGHPEDDDVDGTAPPNSAESSSSKDGGLHDRAKR
ETAREVGGRFVMSHMWDLEDPRLLVCEAKSLHSTKKQRDHYLSSTSKEDRPAVTLVSLFV
SPDHGTIVQDTFPLSPTYSRLLGVQVPFFYLLNAHDPDKKSDAKAVTQKVMRDFVGLESC
DKPTKDAMLNFSFYLSIGNMDDAFKAIKAIKSETVWENMAKMCVKTKRLDVAALCLGNMG
HARGARALRQSMKEPQLDARVAMLALQLGMLEEAERLYRGCGRHDLVNRLYQDGGIWSKA
LETAESSDRIHLRSTHYNYAKHLESKGDFSGAISHYEKSDTHRFEVPRMLFDDLPTLEDY
IMHTNDRALRRWWAQYLESTGEMETALQFYEAAQDHLSLVRVYCYCNNLQKAADIANETG
DRAACYHLARQYENVAQVKEAIHFFTRAQAYGNAIRICKENGFEDQLMNLALVAGPQEQI
DAARYFSSSERRQLPKAVMLYHKAGLLSKAVDLAFKSGQVSAVGQIAGELDESADPALIQ
RCAQYFISNGQFDRAVSLLITGKQYFDALDLCVEHNVWITEEIAERFTLPKDEMARNQIL
EKVAECAYAQENYKLATKKFTQAGNKVKAMKCLLKSGDTERIVYFANVCRQREIYIMAAN
YLQSLDWRKEPDIMRNIIQFYSRAKATALLAGFYDSCAQVEIDEYQNYEKAAGALNEAYK
SLTTSNDPQAQERLPAVQYKLEKVKQFIGIKRMFATDGDSAIQELQELLADPNIEVAVRQ
GDIFAVIVEYYTANNNFKSALGALQEMKNKLPKANPSYYIDAQTLKAISRTTGMNFTGTE
NGELDGGGSEDEGNASEEEVVEEEDEEERPQHFALNGSARFF
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atgtcactctactttgactgcatagtagatagtcctcatacaagtgccatcaatacccag
atatcatggcaccctcaggcttcatgtcttgctgtagcagcttacagtgaagataaagga
ggagcagtgaatgtgtacactggggagggtaaactgtgtgatgaagtggacatcccccca
catccaactgctcaagtgacatctgttatgtggcacccaagcaagaggattctggcagtt
ggctgggaatcaggagagcttttcctttggaatgatcatgagcatgaacttcatgaaatc
cagagtctccatcgagcgccaatctccattctcatgtttagtgcagcaggaacaagactt
gtatcagcagatgcatctggctctactgtgggttggcgggtggataactctggtaatcta
caaacagtgttcacacatgagctaaaagatcctcttgtgcagattgtctacagagtcagc
attaacacagacaagaacctctccactttggatatcaatggccttgcacgtgctgcagtg
agtggtgatgaaagagccttggatatatttagctcttggaggccaagaacaggtcacaaa
cgactcagccttgctgctaatgccaaggacaatcttaactttttcttaggatcatctact
ggtgtcttgtaccatgtaagtgacagtggaaactgtgttgaggttcttcaggctgatggt
ggcataaaatgccttttacatcatgaatcccggaacttgctcgtggtcatcacggaaggc
atggttttaggacagttctctgtagcattagatggttctgtcacagaggtcaataaggta
aagttgagtggaagaactaatgacattcaggttacctgggcaggcagtggcttgttggct
gtttcaacaggagacagttctgttcgtctgtggaatttagactctggggataattatgtg
ttaagtttacaaggcccaagctatcgtgatcaagaatatgtcatgtgtttaagttattca
gagaataaaaaaatcctttgtgcgggaacaaaccttggtagtgtggccatgtggaagttt
gaggaacacaaacttggggaagatgaatatatgaaagacccagagaaagattggaaactg
caaaatcccacagtcatctctggggctgttaaacaggtttcttggggatcgactcagaac
ttattggctgttaatactgtacgagatgtgtatatattgaatgaacagcacatggtggct
agctacaaagatcaggtatcagtagtgcaggtttctccaacgcaactgtctgtggatata
ttctctgggggaagtcacctagagttacgtgcagaaattcaagtgagaggtgttcacaac
acagtggatcacctcctgctatggaatatgaagaaaatggttgtgtatgaaataacttct
gatgcaacccacctcagagttgttgcatcatttccatgtgaagctgagagtgcagtctta
catgaaggcagcacatattccattgaaggtggcagtgttcaagtgcgatcccttcaagga
actgtaaaacaaactctcaacttcacagagagtgaaggtgaaccaattggtcttgatgtt
tgtgggaactttctagtaactgcctcactgcaaggaattgtcaagctttgggacctgtca
aggagggaagccaaaccacatacacaaggcaagcacatgagtgaaactattaaggacttt
ggggaaatcatctcagctcgctgtaactgtaatggtactcgagtctccattgctgtggct
cagacatctcttctcccagatcccaagctttacatttgggatatagaaaatgataacatt
acatatttcaattttgcttcgggccatccagaggatgatgatgttgatggaactgctcca
cctaactcagctgaaagttctagttccaaagatggtggtttacatgacagagcaaaacgt
gaaacagcaagagaagttggaggtcgctttgtaatgtctcatatgtgggatttagaggac
cctcgcctccttgtctgtgaggctaagtctcttcacagcaccaagaagcagagggatcat
tacttaagctcaactagtaaggaggataggccagcagttacattggtatctctatttgtg
agtcctgatcatggcaccattgtccaagacacattcccactgagtcctacatactctcgc
ctccttggagttcaagtccccttcttttatcttctcaatgcccatgatcctgataaaaag
tcagatgccaaggccgtgacacagaaagtgatgcgggattttgtgggtttagagagttgt
gataaacccactaaagatgccatgcttaacttctctttctacctgtccattgggaatatg
gatgatgctttcaaagccattaaggctatcaaaagtgaaacagtttgggaaaatatggcc
aagatgtgtgtcaaaacaaaacgtttagatgtggctgctctctgtctgggcaacatgggt
catgcaaggggagctagagctctccgacaatctatgaaggaaccgcagttagatgccagg
gtggctatgttggctttacagcttggtatgctggaagaggcagaacgtttataccgtggg
tgtggacgccatgacttggtcaatcgtttatatcaggatggtggtatctggtccaaggca
cttgaaactgcagagagcagtgacagaattcatttgcgatctacacattacaattatgca
aagcacttagaaagcaaaggagacttcagtggagccataagccactatgaaaagtctgac
acccacaggtttgaagttcctcgaatgctttttgatgatttaccgacacttgaagattat
ataatgcacaccaacgatcgagctttaaggagatggtgggcacaatatctggaatctact
ggtgaaatggagacagcacttcagttctatgaagctgctcaggatcacttgtctttagtg
agagtttattgctactgtaacaatcttcagaaggctgcagatattgctaacgaaactgga
gatagagcggcatgttatcacttggcaaggcagtatgagaatgtcgcacaagtaaaggag
gctattcacttctttacaagggcacaggcatacggcaatgccatcaggatctgcaaggaa
aatggatttgaagatcagttaatgaatctggcccttgtggctggaccacaagaacaaatt
gatgctgcaagatacttctcgtcctctgaacgtcgtcagcttcctaaggcagtgatgctg
taccataaggcaggacttctttctaaggctgttgatctggcatttaaatctggacaagtc
agtgctgttggacaaattgctggagaactagatgagagtgcagatccagcactcattcaa
agatgtgcacagtattttatttctaatgggcaatttgatcgtgcagtgtccttacttatc
actggaaaacagtactttgatgctcttgatctgtgtgtggagcacaacgtttggatcaca
gaagaaatagctgaaaggtttacccttccgaaagatgagatggctcgaaaccagatcttg
gaaaaggtggcagagtgtgcctatgctcaagagaattataaactggctactaagaagttt
actcaggctggcaataaggtcaaggcaatgaaatgtctacttaaatctggggacacagaa
cgcatcgtgtactttgccaatgtttgccgtcaacgagagatatacatcatggcagcaaat
tatctgcagagcttagactggcgcaaggagcctgacattatgcgcaacataatccagttt
tattccagagcaaaggccactgcactgttagcaggtttttatgactcttgtgctcaggtt
gaaattgatgaataccaaaactatgagaaggctgcaggagcattaaatgaagcttacaaa
tccttgacaactagtaatgatcctcaggctcaggagaggcttcctgcagttcagtacaaa
cttgagaaggttaaacagtttattggcattaagagaatgtttgctacagatggagattca
gccattcaagaacttcaagaactcttggctgatccaaatattgaagttgcagtgaggcag
ggtgacatatttgcagtcatagtagagtattacactgcaaataacaatttcaagtcagct
ctaggagccttgcaagaaatgaaaaacaagctgcctaaggcaaacccaagctactacata
gatgcccagacactgaaagcaatttcaagaacaacaggtatgaatttcactggaacagaa
aatggggagctagatggaggaggtagtgaagatgagggtaatgcaagtgaggaggaagta
gtagaggaagaggacgaagaggaaaggccacaacattttgctctaaatgggtcagcgagg
tttttctga
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integrated database retrieval system
