Panulirus ornatus (ornate spiny lobster): 139766696
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Entry
139766696 CDS
T10834
Symbol
Not1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
porn Panulirus ornatus (ornate spiny lobster)
Pathway
porn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139766696 (Not1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porn03019
]
139766696 (Not1)
Messenger RNA biogenesis [BR:
porn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139766696 (Not1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139766696 (Not1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
NOT1_connector
DUF3819
CNOT1_HEAT
CNOT1_1st
DUF6384
Motif
Other DBs
NCBI-GeneID:
139766696
NCBI-ProteinID:
XP_071551718
LinkDB
All DBs
Position
58:complement(28344756..28905360)
Genome browser
AA seq
2527 aa
AA seq
DB search
MNLDSLTAALSHIGNLVASLTKKNLNSSVQEIQEVVCQFGGEAERHLYRVLIGHLEWSGP
QGGESHRPSPNNNNNNKDKEPASSVGVTTLSWSSSSSGAGPLLLQHLAATLPPTPFIANL
AFATANPPNPSKFIKPQWVGGVCKALRLSRLQEITHCLFLLQATNQEVRNQATALLKAKL
PDLVRAYVDSESGDRELLELSTEALHLLLTQIVHLWRDPPASLLPPESRQAFICALQREF
PRSRVPVVLAPLLYPDSDIPMEKITQETPANMAKNLLDGSLADLVLELGYSFCNTVEECR
NNLANFGVGSITPAAVAKVLGVMVRTHTGLPSEQIGLQNLNSPSSLWSDSKDKAPSSQPQ
SSSGNEVGLSGSGSLAGPHGWNVEVFIKGLLEVAPNLNVKEVFTKLDHKGFLVKDRQGLK
LLITALRCLLQGQGLRLELFPVDCFYHQWKNSEEQLSLVTQILKNSEIFCFTDFPCHLVS
TDCLKTLPELDNKEVATWKSVQLLETLLYLGEAGQYTAVKELFKFPIQHCPDILVLGLVQ
VTLPYTMLRQDLIASLIPIFLGNHPNAAIILHHAWHAQNHANTVRQIIMHAMAEWYMMVD
NDQTRLSRILDVAQDLKALSLLLNAQSFPFVVDLACLAYRREFLKLDKWLTDKIREHGEP
FVSACIKFLQRRCPQLVGGKEDMIPKSSQLPPETMATILVCLNAYAMNVSQELSDTILQM
VQNCNLMNRPRTQQVGVIGFPGPGPAQSSDGPLGNIASSLNNLNLSGAGVSSSIFPTPAS
SSMSSLGGLGSLGTAPGSPGRPLGPSTASGTSQSPLSSILPALQLGPPHPAAVGSQLPTL
PTSSIISSLRSHSVQPTVAPARQMDMSQIFDMPQLVSKEVEDEANSYFQRIYNHPPHPTL
SIEEVLDMLKKFHESSNKREREVYSCMLRNLFEEYRFFPTYPDKELFTTARLFGGIIEQG
LVEYMALGVALRYVMEALQKPHGSKMYYFGIVALDRFRSRLKEYPRYCQHLMAIQHFNEF
QPHLIEYIKYGTQSQEPPSRPSGVVLPPSINVSPSTPAPGTSASAVAAAATVVGVPPPPI
VSTVVSSVAKTITATTTTTTTTAVTKPQSMSVSSAAVGSGKQPTITTTNIETLLVATEKE
EKITPPPEHIQDKVAFIFNNLAQVNLAQKCEELREVVGDEYWVWVAQYLVMKRASIENNF
HTLYSLFLDQLKINNVNTMVCRETLRNIKVLLRADKSAANFSDKSLLKNLGHWLGMLTLA
KNKPILHTDIDMKSLLIESYNKGSQEMQYVIPFVAKVMESCAKSRVFKPPNPWTMAIMNV
LAELHKEPEMKLHLKFEIEVLCNKLEINLEDLKPANVLNDRERIARLKPQLSQPGGSKRA
ESTPLFPTLQGFSSSSFMPKTSWSQVTPSGAVVDTSTVTAQSSSVGATPTPPTVLPPHPS
TTPTPIQAQQQPASEPRFIYSDISITSLRGLDPHISVSVPQVCGVATNAQLKQLVRHAVE
LAVQEIVAPVIDRSIKIAINTVEHIIKKDFALDPDESRMRAATHHMVRNLTAAMAMITCR
DYLATNIPKSIKQGLMQAFNRANPQQLPQQVEQMEQLAAAIAQENVGIACAFIQKTAAEK
AVNEMDKRLTQEYEARKVARTEGRRYCDPMVLTYQAERMPEQIRLKVGGVTPPQMAVYEE
FARNIPGFLPITDQDTMFLAKPVPISSQQQQQQQQQQQQQQQQQPQPPHTQQQAFGSDEA
TAFLVLTERISAELEHTIQAFTTLAPTSPLIPMLHSLREGLLLTRNNRDAHTAQVLLRKC
VENLMEGARELSSEPELNQLALRFRDCHLIVLKAMADHRSYGMVWTSKNITKFWAEARDE
IKYNLDVVDWLIRSNLVSLQLLDEHLARTLDDPRVHSYIPPLFVMQLVQVYLIDDPSNSV
LSETDLQLTLEALVRMCHTRQAPDGLVSLIEALRMKHDLLTGERLAGGNSLSGSNNPLSA
GPSLHFHSGVTQARDFQDPPALQEKTEVLLREWIQMYHSPTAGQGSASAFQHFVKQMNLH
GILKTDDLITRFFRICISMCRDLCVRSILEQGQGPAPTYVRSKCFQNLDAFVRLIALLVK
HSGEATNPTTKINLLNKVLGLVCGIMIHDIESNGTEFQQLPYHRILIMLFLELNAPEAIL
ESINLPVLMAFTQTLHLLRPSKCPGFAYAWLEIVSHRVFIGRMLAITPQQKGWSMYSMLL
ADLFKFLAPFLRNAELAKPLNVLYKGTLRVLLVLLHDFPEFLCEYHYGFCDVIPPNCIQM
RNLILSAFPRNMRLPDPFTPNLKVDMLPEITVSPKIHTTVANLIQPPEFKKNLDSYLKNR
TPVTFLSDMRTYLQQVSSEPGMRYNMSVMNSLVLYVGMQAIAQINNKGLTPSMSTIAHSA
HMDIFQNLGVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTLLHLFAEANTEAIQEQITR
VLLERLIVNRPHPWGLLITFIELIKNPSFKFWSHEFVKCAPEIEKLFESVARSCMVQKVS
ATRDGEA
NT seq
7584 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagactcgctaactgctgctttgtctcatattggtaatctggtcgccagtttg
acaaagaaaaacctgaactctagtgtccaagagattcaggaagtggtgtgtcagtttggt
ggtgaggcagagcgacacttgtaccgggtgctgattggtcacctggagtggtcaggacct
cagggaggagaaagtcatcgaccctcaccaaacaataacaataataataaggacaaggag
cctgcctccagtgttggtgtaaccaccctttcgtggtcatccagtagtagtggggctggt
cccctccttttacaacacttagctgccactcttccaccaacaccttttattgccaatctc
gcctttgccactgccaacccacccaatccaagcaagttcatcaagccacagtgggtcggt
ggagtgtgtaaggcacttagactttctcggttgcaggaaattacacattgtttgttcttg
ctccaagcaactaatcaagaagttcgtaaccaggccacagcattactcaaagccaaacta
cctgatcttgtacgggcctacgttgactctgaatcaggagaccgtgaattgttggagcta
tcgacagaagcccttcatttgttgctaactcaaattgttcatctgtggagggatccacct
gcttccctgctgcctccagaatcacggcaggcctttatttgtgctctgcagcgcgagttt
cccaggtcacgtgtccctgtggttcttgcccctttactttacccagattcagacattcct
atggagaagataactcaagaaacaccagccaacatggctaaaaatcttttggatggctca
ttagctgacttggtcttagaattgggctatagtttctgcaatacagtagaagaatgtaga
aacaacttagccaactttggagtgggttccataaccccagcagctgtagctaaagtcttg
ggtgtcatggttcgaactcacacaggcctaccatctgaacagattggactccagaatcta
aattcaccgagctcattgtggagtgacagcaaagacaaggccccaagttctcagcctcaa
tcatcatctggaaatgaagtgggattgagcggatcaggaagccttgcaggtcctcacgga
tggaatgtagaggtctttatcaaaggcctccttgaggttgccccaaatcttaatgtgaaa
gaggtttttacaaaactagaccacaaagggttcttagttaaagacagacaaggattaaag
ctgctcattactgctctcagatgtcttctccaaggccagggactaagattagaactgttc
cctgtggattgtttctaccaccagtggaagaactcggaggaacaactcagtcttgttacg
cagattctcaagaattctgaaatattctgtttcacagatttcccatgccaccttgtatcg
acagattgtctgaagacactgccagaattagataacaaagaggtggcaacttggaagtca
gttcagctacttgaaactctcctctatttaggggaggcagggcaatacacagctgtcaaa
gagctattcaagtttcccatccagcattgcccagacatattggtacttggcttggtacag
gtgaccttaccatacaccatgctgcgtcaagatctgatagcctcgctcatacctattttt
cttggaaatcatccaaatgcagccattatactacatcatgcttggcatgctcagaatcat
gcaaacacagtccgtcagatcatcatgcatgcaatggcagagtggtacatgatggtggat
aatgatcaaacaagactcagtcgtattttggatgttgcacaagatctcaaagccctgtca
ctcctactcaatgcccagtcatttccatttgttgtagatttggcttgtttggcttacaga
cgtgaatttttgaagctagacaaatggctgactgacaagattcgggaacatggagaaccc
tttgtatctgcttgtataaagttccttcagcggcgatgtcctcagctcgtgggtggtaag
gaggatatgattccaaagtcatcacagctacctccagagactatggctactattctcgtt
tgcctcaatgcatatgcaatgaatgtctctcaggagttgtctgacaccatactacagatg
gtccagaactgcaacttgatgaatcgacctcgaacacaacaggtgggagtgattgggttc
cctggtccaggcccagctcagtcaagtgatggtccattaggcaatattgcatctagtcta
aacaacttaaacctcagtggtgctggtgtgtcttcctcaattttcccaacccctgcatca
tcttccatgagcagccttggtggtttaggatctcttgggacagcaccaggttcaccaggc
cgacctctaggaccttcaactgcttcaggaacttcacagtctcctctgtcctctatttta
ccagcattacagctgggacctccacatccagctgcagtgggatctcaacttcccacactc
cctacttcttccatcatttcatctttacggtctcattcagtgcaacccactgttgcacca
gcaagacaaatggatatgtctcagatttttgacatgccccagctggtgagcaaggaagtg
gaggatgaagctaatagctacttccagcgtatttacaaccaccctccacatcctactctt
tctattgaagaggttttggatatgcttaagaagtttcatgaatccagtaacaagcgagag
cgggaggtatattcttgtatgttaaggaatcttttcgaagaatatcgtttcttcccaact
tatccagacaaagagctcttcactactgcacgtctctttggtggcatcattgaacaaggt
ctagtcgaatacatggctttaggtgttgctcttcggtatgtgatggaggccctccaaaag
ccacatggtagtaagatgtattattttggtatagtggcgttggataggttccgtagtcgc
cttaaggagtacccacggtattgtcagcacctaatggcaatacagcatttcaacgagttc
cagccacatcttattgagtacatcaagtatggcacacagtcacaggagccaccttctcgc
ccctctggtgttgtgcttcctccctccataaatgtgtctccaagtacgcctgctcctggg
acatcagcatctgcagtggctgcagcagctactgttgttggagttccaccaccacctata
gtgtcgactgttgtctcatcagttgccaaaactatcacagccacaactaccactaccacc
accactgctgtcaccaaaccacagtcgatgtctgtttcttcagctgcagtcggatctggg
aagcagccaacaataacaaccaccaatattgagacacttcttgttgccacggagaaggaa
gaaaagattaccccgcctccggagcacatacaagacaaggttgctttcatctttaataac
ctagcacaagttaacctagcacaaaagtgtgaagagcttcgtgaggttgtgggtgatgag
tattgggtttgggtagcgcagtacctggtcatgaaacgtgcatccatagaaaacaacttc
cacacactgtattctctctttttggatcagctcaaaattaacaatgttaataccatggtg
tgccgggaaactctcaggaatattaaggtcctcttgagagcagacaagtctgctgctaat
ttctccgataaatcgctattgaagaatctgggtcattggttagggatgctcacccttgct
aagaacaaaccaatacttcacactgatattgacatgaagtcccttctcatagaatcctac
aacaagggatcccaggaaatgcagtatgtgattccgtttgtggctaaggtgatggaatct
tgtgccaagagcagagtttttaaaccacctaacccatggaccatggctattatgaatgtc
ctagcagaacttcataaggaacctgaaatgaagttgcatctcaagtttgaaattgaggtg
ctgtgtaataagctggagataaatttagaagacttgaagcctgctaatgtgttgaacgac
cgggaacggattgcccgccttaaacctcagttgtctcagccaggtggatcaaagcgagct
gagtcaactcctctcttccctactctgcaaggtttctcctcttccagttttatgccaaag
acaagttggtcacaagttacgccatcaggtgctgttgtcgatacaagtactgtaactgct
cagagctcctctgttggtgccacccctacacccccaacagtcctgcctccacatccctcc
actacacccacaccaatccaagctcaacagcaacctgcctcagagccacgctttatttac
tctgatattagtatcacatccctcaggggtttggatcctcacatatcagtctctgtacct
caggtttgtggtgttgcaaccaatgcacagttgaaacagttagttcgccatgctgtagag
ttggccgtccaagaaattgttgcaccagtcattgatcgcagcatcaagatcgccatcaat
actgttgagcacatcattaaaaaggactttgcattagatccagatgaatctcggatgcgt
gctgcaacacaccacatggtgcgaaatctgactgcagcaatggctatgattacatgtcga
gattatctagccactaatattccaaagagcataaagcagggattgatgcaagcatttaac
agagcaaacccacagcagttgcctcagcaggtggagcagatggaacagttggctgctgct
attgcccaggagaatgttggcattgcctgtgcctttatccagaaaactgccgcagaaaaa
gctgttaatgaaatggataagcgattaacacaggaatatgaagctcggaaggtagcacga
actgaagggcgtcgatactgtgaccccatggttttaacttatcaagccgaacgcatgcct
gagcagattcgcttaaaagtgggtggggtcactccacctcagatggcagtgtatgaagaa
tttgctcgtaatatacctggatttttgcctataactgatcaagacaccatgtttttagca
aaacctgtgcccattagctcacagcagcagcagcagcagcaacagcagcagcagcaacag
cagcagcaacagccacaaccacctcacacacagcaacaggcatttggtagtgatgaagca
acagccttcttggtgctaacagagaggatcagtgcagagttagagcacacaattcaagcc
ttcacaaccctggcacccacctctccactcattcccatgcttcactctttacgtgaggga
ttgttgcttacaaggaacaacagagatgctcatactgctcaagtgctgcttaggaagtgt
gtagaaaacctcatggaaggtgcacgagaattgtctagtgaaccagagttgaatcagtta
gctctacgcttccgagattgccatcttattgttctcaaggccatggctgatcatcgctcg
tatggtatggtgtggacttcaaaaaatatcacgaagttttgggcagaagcaagggatgag
atcaaatataacctggatgttgtagattggctcatccgctccaacttggttagcttacag
ctgctggatgagcatttagcacgaacccttgatgatcctcgagtacactcgtacatcccc
ccactcttcgtaatgcaactagtccaggtttaccttatagatgatcccagcaatagtgtg
ttaagtgaaactgacctacaactcacactagaggccttggtgcgcatgtgtcacacccga
caggctcctgatgggcttgtttccctcattgaggcattgcgcatgaagcatgatttatta
actggggagcggttggcaggaggaaacagcctgagtggttcaaacaaccccttgtcagca
ggacctagtcttcactttcattctggtgtaacacaagcaagagactttcaagatccacca
gctttacaggagaagactgaggtgttgttgagagaatggattcagatgtatcactcccct
actgctggtcagggttctgcatctgcattccagcattttgtcaagcagatgaaccttcat
ggaatcctaaagacagatgacctcattaccagattcttccgtatttgtatcagcatgtgt
cgagatttatgtgtccgttccatccttgaacaaggccagggcccagcacctacttatgta
cgcagcaaatgtttccaaaacttggatgcatttgtgcgacttattgccttattagtcaaa
cactcaggggaggctaccaatccaacaaccaagattaatctactcaataaggttttagga
ttagtgtgtggcatcatgatacatgacattgaatcgaatgggacagagtttcaacagctg
ccataccatcgcatccttataatgctctttctggaactcaatgcccctgaagccattctg
gagtctataaaccttccggttctgatggcctttacacaaacgttgcatctgctaaggccc
agcaagtgcccaggctttgcctatgcttggttggagattgttagtcaccgggtgtttatt
ggacgcatgttggctatcacaccacaacagaaaggatggtctatgtactccatgttatta
gcagatctttttaaattcttagcaccctttttaagaaatgctgaacttgccaagcctctc
aatgttctttataagggaacccttcgtgttttgttggttctcctgcatgactttcctgaa
ttcttgtgcgagtaccactatggattctgcgatgtcatccctccaaattgcattcagatg
cgtaatctcattctctctgccttccctcgaaacatgcgccttccggatccttttacacca
aatcttaaagtggacatgctacctgaaatcacagtatcacccaagatacatactactgtt
gccaacctcattcagcctccagagttcaagaagaatttggattcttatctaaaaaacagg
actcctgttacatttctctcagatatgagaacctatctacagcaggtatccagtgagcct
gggatgcgctacaatatgtctgtgatgaattccctggtgctttatgtaggcatgcaggct
attgcacagatcaataacaagggcctcactccctccatgtccacaattgctcattccgcc
cacatggacatattccagaatcttggtgttgatctggacacagaaggtcgctacttgttc
ctgaatgcaattgccaaccagttgcggtatccaaacagccacacccactactttagctgc
actcttcttcatctctttgctgaagccaacacagaagccatccaagaacagataaccaga
gtgctgctagagcgacttatagtaaatcgaccacatccttggggacttcttattactttc
attgagcttattaagaatccttctttcaagttttggagtcatgaatttgtaaagtgtgcc
ccagaaattgagaaattgtttgaatctgtggcacgatcttgtatggtgcagaaggtgtca
gcaacacgtgatggcgaggcctga
DBGET
integrated database retrieval system
