Porphyrobacter sp. YT40: E2E27_08295
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Entry
E2E27_08295 CDS
T06153
Symbol
uca
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00220
Arginine biosynthesis
pot00791
Atrazine degradation
pot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
E2E27_08295 (uca)
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
E2E27_08295 (uca)
Enzymes [BR:
pot01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
E2E27_08295 (uca)
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_5
Biotin_lipoyl_2
RnfC_N
NQRA
DUF2118
Motif
Other DBs
NCBI-ProteinID:
QDH34319
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Position
1796476..1800018
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AA seq
1180 aa
AA seq
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MRFDSVLIANRGAIASRIIRTARAMGLRTVAVYSEADAGSLHVSAADEAVCIGPGSAAQS
YLNVEAILAAAKATGAGAIHPGYGFLAENAEFAEACAAAGIAFIGPTPQNIRTFGLKHSA
RALAKAHGLPLAPGTDLLTGEDAAAEAAARIGYPVMLKATAGGGGIGMRVCESEAQVREG
FAAVVRQGEASFGDAGVFLERYIPRARHIEVQIFGDGKGRVMALGERDCSLQRRNQKVVE
EAPAPCLSDAKRSQLIAAAVRLGEAAQYLSAGTVEFLYDAAREDFFFLEMNTRLQVEHGV
TEEVMGIDLVEWMIRGAAGDFAMLDAPAPIPKGHSVQVRLYAEDPGQDYRPTTGTLTKVA
FPEAIRAETWVMAGSEVSAFYDPMLAKLITRADTREAAIAAMQAALEQSRIDGIETNLRW
LREVVRHEGFTSGNVSTRLLEGVNYQRRAIRVIAGGTATSVQDWPGRLGLWNVGVPPSGP
MDDLSFRLGNRILGNPEGAAGLEVTASGPTLLFESAATICLAGADFGATLDGVAVPRGEA
LRIDAGQTLAMGRASGGGMRGYILIAGGLDVVPYLGSAATFTLGQFGGHAARALVAGDVL
HLGDEPTGTLEPAELPALTRTWELRVLYGPHGAPDFFTEDDIARFLDAEWQVHYNSNRTG
VRLVGPKPQWARRDGGEAGLHPSNIHDNAYAIGAVDFTGDMPIILGPDGPSLGGFVCPFT
VIAEDRWKVGQLSPDDRVRFVPVSVTDTAAPRAIADLSPILAEFPATATRPRTTYRQQGD
RNILVEYGEIVLDIELRIRIHALMQALEAMALPGVIDITPGIRSLQLHFDGERLDQAGAL
AALQQAEEAMGDLADFEAPSRIVHLPLSWRDPAIVETIAKYVGTVRDDAPWCPDNIEFIR
RINGLPDAKAVEDLIFDASYLVLGLGDVYLGAPVATPVDPRHRLVTTKYNPARTWTPPNV
VGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTHRQTQDFTQGKPWLLRFFDQIRFFPVSAE
ELAEWRRDFPHGRRAIRIEETTFRLADYRAFLAENAASIADFEATRQAAFDAERAAWEAS
GEFDRVSELLGADGGAGEVAAIDLPEGADLIEAPFGGSVWKMLVSPGDAVVEGDVIAVIE
AMKMECPFESPASGTVEAIYTGEGQSLAPGAPMLALRRAS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcgactccgtcctcatcgccaaccggggcgcgatcgcatcgcggatcatccgc
acggcgcgcgcgatggggctgcggacggtggcggtctattcggaggccgacgcgggctcg
ctccatgtcagcgcggcggatgaagcggtttgcatcgggccgggctcggcggcgcagtcc
tacctgaatgtcgaggcgatcctcgcggcggccaaggcgacgggggcaggggcaattcat
ccaggctacggctttctcgccgaaaacgccgagtttgcggaggcctgtgcggcagcgggc
atcgccttcatcggaccgaccccgcagaacatccgcaccttcggcctcaagcactcggcc
cgcgcgctggcgaaggcgcacggattgccgctcgcgcccggcaccgacctgctgaccggc
gaggacgcggcggcagaggcagcggcgcggatcggctatcccgtgatgctcaaggcgacc
gccggcggcggcggcatcggaatgcgcgtgtgcgagagcgaggcgcaggtgcgcgagggc
ttcgccgcagtcgtgcggcagggcgaggcgagcttcggcgatgcgggcgtgttcctcgaa
cgctacatcccccgcgcgcggcacatcgaagtgcagattttcggcgacggcaagggccgc
gtcatggcgttgggggaacgggattgctcgctccagcgacgcaaccagaaagtcgtcgag
gaggcccccgcgccctgcctctccgacgccaagcgcagccagctgatcgccgccgccgtg
cggttgggcgaggcggcgcaatacctgtccgcagggacggtcgaattcctctacgatgcg
gcgcgcgaggacttcttcttccttgaaatgaacacccggctgcaggtcgaacacggcgtc
accgaggaggtgatggggatcgatctggtggagtggatgatccgcggcgcggcgggcgac
ttcgccatgctcgatgcgcccgcacccatccccaagggccatagcgtgcaggtgcggctc
tacgccgaagatccgggacaggattatcgtcccaccaccggaacgctcaccaaggtcgct
ttccccgaagccatccgcgccgaaacctgggtgatggcgggtagcgaggtcagtgctttt
tacgatccgatgctggcgaagctgattacccgcgccgacacccgcgaggcagcgattgcg
gccatgcaggccgcgctcgagcagtcccgcatcgacgggatcgagacaaacctgcgctgg
ctgcgcgaggttgtccggcacgagggcttcaccagcgggaatgtgtccacccgcttgctc
gaaggcgtgaattaccagcgccgtgcaatccgcgtgatcgccgggggcactgcgacctcg
gtgcaggactggccggggcggctcgggctgtggaacgtgggcgtgcccccgagcggcccg
atggacgacctctccttccggctcggcaaccgcattctcggcaatcccgagggcgccgcc
gggctcgaagtcaccgccagcggcccgacattgctgttcgagagcgcggcgaccatctgc
cttgccggtgcggatttcggagccacgctggacggtgtggcggtgccgcgcggggaagcg
ctccgcatcgacgccgggcagacccttgcgatgggccgggcgagcggcggggggatgcgc
ggctacatcctgattgcgggcgggctggatgtggtgccctatctcggctcggcggcgacc
tttaccctcggccagttcggcggccatgcggcgcgcgcgctggtggcgggcgacgtgctg
catctgggcgacgagccgaccggcacgctcgaacctgcggagctccccgcgctcacccgg
acatgggagctgcgcgtcctctacggcccccacggcgcacccgatttcttcaccgaggac
gacatcgcgcgcttcctcgatgccgagtggcaggtgcactacaactccaaccgcaccggc
gtgcgtctcgttggccccaagccccaatgggcgcggcgcgacgggggggaggcgggcctg
catccctcgaacatccatgataacgcctacgccatcggcgcggtcgactttaccggggac
atgccgatcattctcgggccggacggcccttcgctgggcggtttcgtctgccccttcacc
gtgatcgccgaggatcgctggaaggtcgggcagttgagccccgacgaccgggtgcgcttc
gtgcccgtcagcgtcaccgacaccgctgcgccgcgcgccatcgccgacctctcgccgatc
ctcgcagaattccctgccaccgccacccgccctcgcaccacctatcgtcagcagggggat
cgcaacatcctcgtcgaatatggcgagatcgtgctcgacatcgaactgcgcatccgcatc
cacgcgctgatgcaggcactggaggcgatggcactccccggggtgatcgacatcaccccc
ggcatccgctcgctgcaattgcatttcgatggcgagcggctcgatcaggcaggcgcgctc
gccgccttgcagcaggccgaggaggcgatgggcgatcttgccgacttcgaggctccctcg
cgcatcgtccacctgcccctcagttggcgcgatccggcgatcgtggagaccattgccaaa
tatgtcggcaccgtacgcgacgatgcgccgtggtgccccgacaacatcgaattcatccgc
cgcatcaacggccttcccgatgccaaggcggtcgaggatctgatcttcgatgcgagctac
ctcgtgctcgggttgggcgatgtctatctcggcgcgccggtcgccaccccggtcgacccg
cgccaccggcttgtcaccaccaaatacaaccccgcgcgcacctggaccccgcccaatgtg
gtggggatcggcggggcgtatatgtgcatctacgggatggaggggccgggcggttaccag
ctgttcgggcgcaccattcaggtctggaacacgcaccgtcagacgcaggatttcacgcaa
ggcaagccgtggttgctgcggttcttcgaccagatccgtttcttccccgtctcggcggag
gaactggccgaatggcggcgtgacttcccgcacgggcggcgcgcgatccgcatcgaggag
acgaccttccgcctcgccgattaccgcgcctttctggccgagaatgccgccagcatcgcc
gatttcgaagccacgcggcaggccgccttcgatgccgaacgcgccgcgtgggaggcaagt
ggcgagttcgaccgggtcagcgaattgctcggggcggatggcggcgcaggcgaggtcgcg
gccatcgacctgcccgaaggcgcggacctcatcgaagcgccctttggcggaagcgtgtgg
aagatgctggtgagccccggcgacgcggtggtggagggcgatgtgatcgcggtgatcgag
gcgatgaagatggagtgccccttcgaatcgcctgccagcggcacggtggaggcgatctat
accggcgagggccagtcgctcgcccccggcgcgccgatgctggccttgcggagggcttcg
tga
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