KEGG   Porphyrobacter sp. YT40: E2E27_09655
Entry
E2E27_09655       CDS       T06153                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pot  Porphyrobacter sp. YT40
Pathway
pot00010  Glycolysis / Gluconeogenesis
pot00020  Citrate cycle (TCA cycle)
pot00260  Glycine, serine and threonine metabolism
pot00280  Valine, leucine and isoleucine degradation
pot00310  Lysine degradation
pot00380  Tryptophan metabolism
pot00620  Pyruvate metabolism
pot00630  Glyoxylate and dicarboxylate metabolism
pot00640  Propanoate metabolism
pot00785  Lipoic acid metabolism
pot01100  Metabolic pathways
pot01110  Biosynthesis of secondary metabolites
pot01120  Microbial metabolism in diverse environments
pot01200  Carbon metabolism
pot01210  2-Oxocarboxylic acid metabolism
pot01240  Biosynthesis of cofactors
Module
pot_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pot_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pot_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pot_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pot00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    E2E27_09655 (lpdA)
   00020 Citrate cycle (TCA cycle)
    E2E27_09655 (lpdA)
   00620 Pyruvate metabolism
    E2E27_09655 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    E2E27_09655 (lpdA)
   00640 Propanoate metabolism
    E2E27_09655 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    E2E27_09655 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    E2E27_09655 (lpdA)
   00310 Lysine degradation
    E2E27_09655 (lpdA)
   00380 Tryptophan metabolism
    E2E27_09655 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    E2E27_09655 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pot04147]
    E2E27_09655 (lpdA)
Enzymes [BR:pot01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     E2E27_09655 (lpdA)
Exosome [BR:pot04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   E2E27_09655 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 NAD_binding_8 FAD_binding_2 GIDA AlaDh_PNT_C HI0933_like FAD_binding_3 Thi4 Lys_Orn_oxgnase AstA 3HCDH_N Lycopene_cycl DAO
Other DBs
NCBI-ProteinID: QDH34567
LinkDB
Position
complement(2063435..2064835)
AA seq 466 aa
MSEFDYDVLIIGAGPGGYVAAIRAAQLGLKTACVESRETLGGTCLNVGCIPSKALLHGSE
LFEEAAGGHFATWGITATPTLDLGKMMAEKTKAVGELTGGIEFLFKKNKVTWLKGHAAFE
DAHTVDVAGQKVTAKDIVIATGSSVTPLPGVTVDNAGKRIVDSTGALDLDEVPEHLVVIG
GGVIGLELGSVWRRLGAKVTVVEFLDQLLPGMDGEVRKEAQKIFKKQGMEMMLGHKVTGA
TVEGTGVNLTVEPAAGGEAKTIAASHVLVAIGRRPNTEGLALEKAGLSTNNRGQIEIDHD
FRTSVDGIWAIGDVVPGPMLAHKAEDEGIAVAENIAGQTGIVNHDVIPSVVYTAPEIAGV
GLTEEQAKERGLAVKVGKFPMMANSRAKANRDTDGFVKVIADAATDRVVGVWMINSLAGT
MIAQAAQAMEFGATSEDIAYTCHAHPTHAEAFKEAAMAVTGKPIHM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtcggaatttgactacgacgtcctgatcatcggtgccggccccggcggctatgtcgcg
gcgatccgcgcggcgcagctcgggctgaagaccgcctgcgttgaatcgcgcgagacgctc
ggcggcacctgcctcaatgtcgggtgcattccctccaaggcgctgctgcacggctcggaa
ctgttcgaggaagccgcgggcggccacttcgccacctggggtatcaccgccacgccgacg
ctcgatctcggcaagatgatggccgagaagaccaaggcggtgggcgaactgaccggcggg
atcgaatttctgttcaagaagaacaaggtcacctggctcaagggccatgccgccttcgag
gacgcacataccgtggacgtggcggggcagaaggtcaccgccaaggacatcgtgatcgcc
accggttcgagcgtcaccccgcttcccggcgtgaccgtggacaacgcgggcaagcgcatc
gtcgattccaccggcgcgctcgatctcgatgaagtgcccgagcacctcgtggtgatcggc
ggcggcgtgatcgggctggaactgggctcggtgtggcgtcgcttgggtgccaaggtcacc
gtggtcgaattcctcgaccagctgctccccggcatggacggcgaagtgcgcaaggaagcg
cagaagatcttcaagaagcagggcatggagatgatgctcggccacaaggtcaccggcgcc
acagtcgagggcacgggcgtgaacctgaccgtcgagcccgcagccggcggcgaggccaag
accatcgctgcgagccatgtgctggtcgcgatcggacggcgtcccaacaccgaagggctg
gcgctcgaaaaggcgggcctttccaccaacaaccgcggccagatcgaaatcgaccacgat
ttccgcacttcggtagacggcatctgggcaatcggcgacgtggttcccggcccgatgctc
gcgcacaaggccgaagatgaaggcatcgccgtggccgagaacatcgccgggcagaccggc
atcgtgaaccacgatgtcatccccagcgttgtctacaccgcaccggaaatcgcgggcgtg
gggctgaccgaggagcaggccaaggagcgcgggctcgcggtcaaggtcggcaagttcccg
atgatggccaacagccgcgccaaggccaaccgcgacaccgacggcttcgtcaaggtgatc
gccgatgccgccaccgaccgggtcgtcggcgtttggatgatcaactccctcgccggcacg
atgatcgcccaggccgcgcaggcgatggaattcggtgcgacctcggaagacatcgcctac
acctgccacgcgcacccaacccacgccgaagccttcaaggaagcggcaatggcggtaacg
ggcaagccgatccacatgtaa

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