Paralichthys olivaceus (Japanese flounder): 109636572
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Entry
109636572 CDS
T06037
Symbol
lsm4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov03018
RNA degradation
pov03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109636572 (lsm4)
09123 Folding, sorting and degradation
03018 RNA degradation
109636572 (lsm4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pov03019
]
109636572 (lsm4)
03041 Spliceosome [BR:
pov03041
]
109636572 (lsm4)
Messenger RNA biogenesis [BR:
pov03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109636572 (lsm4)
mRNA degradation factors
5'-3' decay
Lsm complex
109636572 (lsm4)
Spliceosome [BR:
pov03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109636572 (lsm4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
109636572
NCBI-ProteinID:
XP_019953901
LinkDB
All DBs
Position
Unknown
AA seq
149 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGAQQNKQQGKGRGGAGRGLFGGRGRGLSG
PGRGQQQQLQLPQQQDKKPGKPQGVKNQH
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctctctctgctgaagactgcccagaaccaccctatgctggtggagctgaaa
aacggggagacgtataacggtcacctggtcagctgtgacaactggatgaacatcaacctg
agagaagttatctgtacttcaagggatggagataagttctggaggatgcctgagtgctac
atcagaggaagcactatcaagtatctgcgaatcccagacgagatcattgacatggtgaag
gaggaggtggtgtcaaagggccgtggacgtggaggtgcccagcagaacaaacagcagggc
aaagggaggggaggagctggccgaggtctgtttggtggtcgtggcagaggactgagcggt
cccggtcggggccagcagcagcagctacaactaccgcagcagcaggataagaaaccaggc
aaaccacagggagtgaagaaccagcactga
DBGET
integrated database retrieval system
