KEGG   Paralichthys olivaceus (Japanese flounder): 109641109
Entry
109641109         CDS       T06037                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pov  Paralichthys olivaceus (Japanese flounder)
Pathway
pov03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pov00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109641109 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pov03041]
    109641109 (sf3a1)
Spliceosome [BR:pov03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109641109 (sf3a1)
 Complex B
    109641109 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    109641109 (sf3a1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 109641109
NCBI-ProteinID: XP_019960998
LinkDB
Position
Unknown
AA seq 782 aa
MPPGPVQIIQPESNNKNDAPVEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKAQEPSAAVPKVMQAMLQSQQLPQK
VQVIQEAVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRNY
QFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLIKMKKEAENPREVMDQVRYRVEWAKFQ
ERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQER
YEKYGESEEVEMEVESEDDDDEREARDSGQPSQPDQDTQVQDMDEGSDDDDDGMKAPLPP
DNPMPPPLPPTPDQVIIRKDYDPKASKPQPSIAAPDAYLISPITGEKIPASKMQEHMRIG
LLDPRWLEQRDRIIKERQIEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEEE
IQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPSD
IHHQPSIPSSAANLQKPGPPITIVPRPPSSMAPPVRTTLLSAVPVIPRPPMAPVVRLTPG
QVLAPMPPMISAPRINMVPMPPSAQHIMAPRPPPMVVPTAFVPAPPVPQPPSSAPAPPSH
PPPPHEDEPISKKMKTEDNLIPEEEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTV
PLTDQVSVIKVKIHEATGMAAGKQKLQYEGIFIKDSNSLAYYNMNNGSIIHLALKERGGR
KK
NT seq 2349 nt   +upstreamnt  +downstreamnt
atgccgcccgggcctgttcaaatcattcagccggagtccaacaataagaatgatgcacca
gtagaagaaaccccagcgaccaaaccgatcgttggtatcatatatccacctcctgaggtc
cgaaacatagttgacaagacagccagttttgtcgcaaggaatgggcctgagtttgaagca
agaatccgacaaaatgagatcaacaatcccaaatttaattttctcaatcccaatgacccc
taccatgcttactaccgtcacaaggtcaatgaatttaaggagggaaaagcacaggaaccc
tctgcagcagtacctaaggttatgcaggccatgctgcagtcccagcagcttcctcaaaag
gttcaggtgattcaggaggcagtggttcctaaagaaccacctcctgagtttgagttcatc
gcagatcctccatcaatctcagcatttgacctggatgttgtcaagctcactgcccagttt
gtggctcgcaatggccgccagtttcttactcagctcatgcagaaagaacagaggaactac
cagtttgactttctgcggccacagcacagccttttcaactacttcaccaaactggttgaa
cagtacactaagatactgatccctcctaaaggcttactgatcaagatgaagaaagaggct
gagaatccaagagaggttatggaccaggtgaggtaccgtgttgagtgggcaaaattccag
gagcgtgagagaaagaaagaggaggaggaaagggagaaagaacgagtggcatatgcccaa
attgactggcatgactttgtagtggttgaaactgtagattttcagcccaacgaacaaggc
cacttccccccacccaccacaccagaggagcttggtgcccgcatcctaatccaagagcgc
tacgagaagtatggagagagtgaggaggtggagatggaggttgagagtgaggatgatgac
gatgaacgggaggctcgggacagtggccagccctcacaacccgatcaagacacacaagta
caggatatggatgagggatctgatgacgatgatgatggcatgaaggctccactgccacca
gacaaccctatgccacccccgctgcccccaactccagatcaggtcatcattcgcaaagac
tatgacccgaaagcttccaagcctcagccctcaattgcagctcctgatgcgtacctcatc
tcaccaattactggtgagaagatcccagccagtaagatgcaagagcacatgcgtattggt
ctgctggatccgcgctggctggagcaaagagaccgcattatcaaagagaggcagattgag
gatgaagtctatgctcctggtctggacatcgagagcagcttgaaacagttggccgagagg
cgtaccgacatcttcggtgtggaagagacggccatcggtaaaaagattggtgaagaagaa
atccagaagccagaagagaaggttacctgggatggccactcaggaagcatggctcgtacc
cagcaagcagcacaggccaacatcaccctacaggagcagatcgaagccattcacaaggct
aaaggactagtgggagaggacgataccaaggagaaaattggcccaagcaagccgagtgac
attcatcaccagccttccatcccctcgtctgcagccaatctacagaagcccggtcctcct
atcaccatagtgccacgcccaccctcctctatggcccctccagtgcgcaccaccctcctg
tctgctgtacctgttattccaagaccacctatggctcctgtggtgcgccttacacctgga
caggtcttagcaccaatgcctcccatgatttctgctccccgcatcaatatggtccccatg
cccccatcagcacagcacatcatggccccaagaccacccccaatggttgttccaactgcg
tttgtcccagctcctccagtaccacaaccacccagctctgctcctgctccaccttcccac
ccacccccacctcatgaggacgaaccaatcagcaaaaagatgaagactgaggacaacctt
attccagaggaggagttccttcgcagaaataagggtcctgtggcagttaaagtacaagtc
cccaacatgcaggacaagactgaatggaagctaaacggccaagtgctgaatttcactgtc
ccgctcacagaccaggtgtctgttattaaagtcaaaatccatgaagcgacaggcatggcc
gcaggaaaacagaagttacaatacgagggcattttcatcaaggattccaactctctagct
tattacaacatgaacaacggctccatcattcacttggcactgaaagagagaggaggcaga
aagaagtga

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