Paralichthys olivaceus (Japanese flounder): 109641181
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Entry
109641181 CDS
T06037
Symbol
atg16l1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pov
Paralichthys olivaceus (Japanese flounder)
Pathway
pov04136
Autophagy - other
pov04140
Autophagy - animal
pov04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pov00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109641181 (atg16l1)
04136 Autophagy - other
109641181 (atg16l1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
109641181 (atg16l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pov04131
]
109641181 (atg16l1)
03029 Mitochondrial biogenesis [BR:
pov03029
]
109641181 (atg16l1)
Membrane trafficking [BR:
pov04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
109641181 (atg16l1)
Others
Rab GTPases of specific organelles
Auto phagosome
109641181 (atg16l1)
Mitochondrial biogenesis [BR:
pov03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
109641181 (atg16l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
V_ATPase_I
AP5B1_middle
Motif
Other DBs
NCBI-GeneID:
109641181
NCBI-ProteinID:
XP_019961110
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MAERRVELTWKRHISDQLKLRDRVQRHAFEEIIHHYHRLLEKSDLQAVLTERYQTDKYDV
QRESSTGTDSSRSDALQQEMAQMRIKHQEELTELHKKRGELAQSVIELNNQIQQKDKEIQ
SNEAKMLEYQQQINDLEGDCRELRSFLQDLERANQTLKDEYDALQITFSALEEKLRKTTE
DNQELVSRWMAEKAQEANKLNAENEKDSRRRQAKLQKELADAAKEPLPIDPEDDIEVLTE
DGGKGGGETSQNRPLSRTPSKKMSQTPPAGLLDSISNIFGRRAANSFSSSPENPDAPSGV
CTEVRVPSMALHVFEAHDGEVNAVQFSPGSRLLGTGGMDRRVKLWEVVAGRCECKGALTG
SNAGITSIEFDSTGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSARFLLDNARIV
SGSYDRTLKLWDLRSKVCMKTVFAGSSCNDIVCTEQCVMSGHFDKKVRFWDIRAESIVHE
LELLGRVTSLDLNIDRTELLTCSRDDLIKIIDLRTNAVRQTFSAQGFKCGADWTRVTFSP
DGSYVAGGSADGALYVWNVLTGKVDRTLDRNHNSAINAVSWSPSGAYVVSVEKGSKAILW
SDM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggtggagttaacgtggaagagacacatctcagatcagctgaagctc
agagaccgagtgcagagacacgccttcgaagaaatcatccaccactatcatcgtctgttg
gagaaatctgatcttcaggctgttctgactgagagataccagacagataaatatgacgtc
cagagagagtccagtacgggaacggactcgagtcgtagtgatgctctgcagcaggaaatg
gctcagatgagaatcaagcaccaggaggaactgacagaactgcacaagaagagaggagag
ttggcgcaaagcgtgattgagctgaacaaccagattcaacaaaaagacaaagagatccag
agcaacgaggccaagatgttggaatatcagcagcagatcaatgacctggagggcgactgt
cgggagctgagaagtttccttcaggacctggagagagcaaatcagacgctgaaggacgaa
tatgacgccctgcagattaccttctccgccctggaggagaaactgaggaagaccacggaa
gacaaccaggaactggtgtctcgctggatggcggagaaagctcaggaggccaacaagctg
aacgcagagaatgagaaggacagcagacgccgtcaggctaaactgcagaaggagctggca
gacgcagccaaagagccactgccgatcgatccggaagacgatattgaggttctgactgag
gacggagggaaggggggaggagagacgtcacagaacagaccgctcagcagaacgcccagt
aagaaaatgtctcagacgccccctgctggtcttctggattccatttctaacatatttgga
cgtcgagcggctaactctttcagttcttcacctgagaaccctgacgctccatcaggtgtg
tgcactgaggttcgagtcccatcaatggcgctgcacgtgtttgaagcacacgatggcgag
gtgaacgctgtccagttcagccccggctctcgtctcctgggcacaggaggaatggaccgc
agggtcaagctgtgggaggttgttgcaggtcgctgtgagtgtaaaggagctctaacagga
agtaacgcagggatcaccagtattgagtttgacagcacgggttcatacctgttggctgct
tctaacgacttcgccagtcgcatctggacggtcgacgactacagactgaggcacaccttg
acaggccacagtgggaaggtgctgtctgctcgtttcctgttggacaacgctcgaatcgtg
tctgggagctacgaccgaacgctcaaactttgggacctccgcagcaaagtctgtatgaag
actgtgttcgctgggtccagctgtaacgacattgtgtgtacagagcagtgtgtcatgagt
gggcacttcgataagaaagttcgattctgggacatcagggcggagagcatcgtacacgaa
ctcgagcttttgggtcgagtaacgtctctggacctgaacatcgaccgaactgagctgctc
acctgctccagagatgacctcatcaagattatcgacctgcgcaccaacgctgtccgacag
acgttcagtgcacagggcttcaagtgtggagcggactggaccagagtcaccttcagtcct
gatggcagctacgtagcaggagggtcagctgacggcgctctgtacgtgtggaacgtcttg
acggggaaagtggaccgaactctggaccggaaccacaactctgctatcaatgctgtgtcg
tggtcaccgtcaggagcctacgtggtcagtgtggagaagggcagcaaggccatcctgtgg
tctgacatgtga
DBGET
integrated database retrieval system
